Evidence map›Paper›PMID 35044192›Full record

ArticleJournal of natural products2022

Untargeted Identification of Alkyne-Containing Natural Products Using Ruthenium-Catalyzed Azide Alkyne Cycloaddition Reactions Coupled to LC-MS/MS.

Daniel Back, Brenda T Shaffer, Joyce E Loper, Benjamin Philmus

Abstract read
In one paragraph

Article in Journal of natural products, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Review
  2. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Daniel BackDepartment of Pharmaceutical Sciences, Oregon State University, 203 Pharmacy Building, Corvallis, Oregon 97331, United States.
Brenda T ShafferAgricultural Research Service, US Department of Agriculture, 3420 N.W. Orchard Avenue, Corvallis, Oregon 97330, United States.
Joyce E LoperAgricultural Research Service, US Department of Agriculture, 3420 N.W. Orchard Avenue, Corvallis, Oregon 97330, United States.
Benjamin PhilmusDepartment of Pharmaceutical Sciences, Oregon State University, 203 Pharmacy Building, Corvallis, Oregon 97331, United States.ORCID 0000-0003-2085-0873

Funding

Research Training in Natural Product Complementary and Integrative Health - Diversity Supplement to T32 Predoctoral Training GrantT32AT010131 · NCCIH · OREGON STATE UNIVERSITY · PI TAIFO MAHMUD, RICHARD B VAN BREEMEN · 2020 to 2026
$1.8M
Acquisition of a 700 MHz NMR SpectrometerS10OD018518 · OD · OREGON STATE UNIVERSITY · PI BARBAR, ELISAR J · 2015 to 2015
$1.3M
A workflow for identification of gene clusters and heterologous expression of cyanobacterial natural productsR15GM117541 · NIGMS · OREGON STATE UNIVERSITY · PI PHILMUS, BENJAMIN · 2016 to 2016
$422k
NCCIH NIH HHS T32 AT010131NIGMS NIH HHS R15 GM117541NIH HHS S10 OD018518
6 · The paper itself

Abstract

Alkyne-containing natural products have been identified from plants, insects, algae, fungi, and bacteria. This class of natural products has been characterized as having a variety of biological activities. Polyynes are a subclass of acetylenic natural products that contain conjugated alkynes and are underrepresented in natural product databases due to the fact that they decompose during purification. Here we report a workflow that utilizes alkyne azide cycloaddition (AAC) reactions followed by LC-MS/MS analysis to identify acetylenic natural products. In this report, we demonstrate that alkyne azide cycloaddition reactions with

Indexed as

Cycloaddition ReactionAlkynesBiological ProductsCatalysisChromatography, LiquidRutheniumTandem Mass SpectrometryAlkynesBiological ProductsRuthenium

Identifiers

PMID35044192
PMCPMC8853637

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.