Evidence map›Paper›PMID 35043584›Full record

ArticleThe journal of pathology. Clinical research2022

Identification of a prognostic signature in colorectal cancer using combinatorial algorithm-driven analysis.

Abdo Alnabulsi, Tiehui Wang, Wei Pang, Marius Ionescu, Stephanie G Craig, Matthew P Humphries, Kris McCombe, Manuel Salto Tellez, Ayham Alnabulsi, Graeme I Murray

Abstract read
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Article in The journal of pathology. Clinical research, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Abdo AlnabulsiPathology, School of Medicine, Medical Sciences and Nutrition, University of Aberdeen, Aberdeen, UK.
Tiehui WangSchool of Biological Sciences, University of Aberdeen, Aberdeen, UK.
Wei PangSchool of Mathematical & Computer Sciences, Heriot-Watt University, Edinburgh, UK.
Marius IonescuAiBIOLOGICS, Dublin, Ireland.
Stephanie G CraigPrecision Medicine Centre, Patrick G Johnson Centre for Cancer Research, Queen's University Belfast, Belfast, UK.
Matthew P HumphriesPrecision Medicine Centre, Patrick G Johnson Centre for Cancer Research, Queen's University Belfast, Belfast, UK.
Kris McCombePrecision Medicine Centre, Patrick G Johnson Centre for Cancer Research, Queen's University Belfast, Belfast, UK.
Manuel Salto TellezPrecision Medicine Centre, Patrick G Johnson Centre for Cancer Research, Queen's University Belfast, Belfast, UK.ORCID 0000-0001-8586-282X
Ayham AlnabulsiAiBIOLOGICS, Dublin, Ireland.
Graeme I MurrayPathology, School of Medicine, Medical Sciences and Nutrition, University of Aberdeen, Aberdeen, UK.ORCID 0000-0003-3981-2420

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Colorectal carcinoma is one of the most common types of malignancy and a leading cause of cancer-related death. Although clinicopathological parameters provide invaluable prognostic information, the accuracy of prognosis can be improved by using molecular biomarker signatures. Using a large dataset of immunohistochemistry-based biomarkers (n = 66), this study has developed an effective methodology for identifying optimal biomarker combinations as a prognostic tool. Biomarkers were screened and assigned to related subsets before being analysed using an iterative algorithm customised for evaluating combinatorial interactions between biomarkers based on their combined statistical power. A signature consisting of six biomarkers was identified as the best combination in terms of prognostic power. The combination of biomarkers (STAT1, UCP1, p-cofilin, LIMK2, FOXP3, and ICOS) was significantly associated with overall survival when computed as a linear variable (χ

Indexed as

Biomarkers, TumorColorectal NeoplasmsAlgorithmsHumansImmunohistochemistryPrognosisBiomarkers, Tumorbiomarkercolorectal cancercombinatorial algorithmcombinatorial analysisimmunohistochemistryprognosistissue microarray

Identifiers

PMID35043584
PMCPMC8977276

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.