Evidence map›Paper›PMID 35043564›Full record

ArticleThe FEBS journal2022

Cellular autophagy, an unbidden effect of caspase inhibition by zVAD-fmk.

Dharaniya Sakthivel, Beatriz E Bolívar, Lisa Bouchier-Hayes

Open access · greenAbstract read
In one paragraph

Article in The FEBS journal, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.8field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 8 citations in OpenAlex.

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  4. Review
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  6. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Dharaniya SakthivelDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX, USA.
Beatriz E BolívarDivision of Hematology-Oncology, Department of Pediatrics, Baylor College of Medicine, Houston, TX, USA.
Lisa Bouchier-HayesDivision of Hematology-Oncology, Department of Pediatrics, Baylor College of Medicine, Houston, TX, USA.ORCID 0000-0003-3886-5977
Baylor College of Medicine · US

Funding

Non-apoptotic functions of caspase-2 in cell division and genomic stabilityR01GM121389 · NIGMS · BAYLOR COLLEGE OF MEDICINE · PI BOUCHIER-HAYES, LISA · 2018 to 2022
$1.8M
Mechanisms of caspase-2 activation by nucleophosmin in AML cell death and survivalR21CA256606 · NCI · BAYLOR COLLEGE OF MEDICINE · PI BOUCHIER-HAYES, LISA · 2021 to 2022
$422k
Exploring the Mechanisms of Inflammatory Caspase Activation in Sickle Cell DiseaseF32DK121479 · NIDDK · BAYLOR COLLEGE OF MEDICINE · PI BOLIVAR-VEGA, BEATRIZ ELENA · 2019 to 2022
$172k
NCI NIH HHS R21 CA256606NIDDK NIH HHS F32 DK121479NIGMS NIH HHS R01 GM121389
6 · The paper itself

Abstract

zVAD-fmk is a widely used pan-caspase inhibitor that blocks apoptosis but has undesirable side effects, including autophagy. In this issue, Needs et al. propose that zVAD-fmk induces autophagy by inhibiting the N-glycanase NGLY1 rather than caspases. NGLY1 is essential for the ERAD response and patients with inactivating mutations in NGLY1 present with neurodevelopmental defects and organ dysfunction. The ability of NGLY1 to inhibit basal levels of autophagy may contribute to this pathology. This study demonstrates possible crosstalk between protein turnover and autophagy while also underscoring the importance of specificity when using chemical tools to interrogate these pathways. Comment on https://doi.org/10.1111/febs.16345.

Indexed as

AutophagyCaspasesAmino Acid Chloromethyl KetonesApoptosisCaspase 3Caspase InhibitorsHumansAmino Acid Chloromethyl KetonesCaspase 3Caspase InhibitorsCaspasesapoptosisautophagycaspaseNLGY1zVAD-fmk

Identifiers

PMID35043564
PMCPMC9177521
OpenAlexW4205127576

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.