Evidence map›Paper›PMID 35043238›Full record

ArticleCurrent genetics2022

Development of versatile and efficient genetic tools for the marine-derived fungus Aspergillus terreus RA2905.

Guangshan Yao, Xiaofeng Chen, Yijuan Han, Huawei Zheng, Zonghua Wang, Jianming Chen

Abstract read
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In one paragraph

Article in Current genetics, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Establishment of the Genetic Transformation System ofJournal of fungi (Basel, Switzerland) · 2026
    Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Development of the CRISPR-Cas9 System for the Marine-Derived FungiJournal of fungi (Basel, Switzerland) · 2022
    Article
  8. Article
  9. CRISPR/Cas9-Based Genome Editing and Its Application inJournal of fungi (Basel, Switzerland) · 2022
    Review
  10. EditingSynthetic biology (Oxford, England) · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Guangshan YaoInstitute of Oceanography, Minjiang University, Fuzhou, 350108, Fujian, China.
Xiaofeng ChenInstitute of Oceanography, Minjiang University, Fuzhou, 350108, Fujian, China. ChenXF@mju.edu.cn.
Yijuan HanInstitute of Oceanography, Minjiang University, Fuzhou, 350108, Fujian, China.
Huawei ZhengInstitute of Oceanography, Minjiang University, Fuzhou, 350108, Fujian, China.
Zonghua WangInstitute of Oceanography, Minjiang University, Fuzhou, 350108, Fujian, China.
Jianming ChenInstitute of Oceanography, Minjiang University, Fuzhou, 350108, Fujian, China. chenjm@mju.edu.cn.ORCID http://orcid.org/0000-0002-1802-2967

Funding

china ocean mineral resources research and development association DY135-B2-13minjiang university JAT190622minjiang university MJY19019minjiang university MYK19011Natural Science Foundation of Fujian Province 2018N2001Natural Science Foundation of Fujian Province 2019J01766Natural Science Foundation of Fujian Province 2021J011043
6 · The paper itself

Abstract

Marine-derived Aspergillus terreus produces a variety of structurally novel secondary metabolites, most of which show unique biological activities. However, the lack of efficient genetic tools limits the discovery of new compounds, the elucidation of involved biosynthesis mechanism, as well as the strain engineering efforts. Therefore, in this study, we first established both an effective PEG-mediated chemical transformation system of protoplasts and an electroporation system of conidia in a marine-derived fungus A. terreus RA2905. To overcome the insensitivity of RA2905 to fungicides, the uracil auxotrophy strain (pyrG gene deletion mutant, ΔpyrG) was constructed using PEG-mediated transformation system, and using ΔpyrG as the genetic background, the methyltransferase gene laeA-overexpression transformants were further constructed through both PEG- and electroporation-mediated transformations, which showed enhanced terrein production. Besides, in this study, an efficient CRISPR/Cas9 genome-editing system was established for the first time in A. terreus, and a higher gene deletion efficiency of 71% for APSES transcription factor gene stuA could be achieved when using short homologous arms compared with conventional long homologous ones. In addition, using a non-integrative Cas9 plasmid, another efficient and marker-free genome-editing system was established, which allowing repeatable and unlimited genetic manipulation in A. terreus. Using the marker-free genome-editing system, we successfully developed the ΔpyrGΔku70 double-deletion mutant in RA2905, which could further improve gene deletion efficiency. In conclusion, efficient genetic manipulation systems along with a variety of functional mutants were developed in this study, which would significantly expedite both theoretical and applied researches in not only A. terreus but also other marine-derived filamentous fungi.

Indexed as

AspergillusGene EditingFungiProtoplastsCRIPSR/Cas9Electroporation of conidiaMarine-derived Aspergillus terreusMarker-free genome editingPEG-mediated genetic transformationUracil auxotroph

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.