Evidence map›Paper›PMID 35042822›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2022

Atomic structure of Lanreotide nanotubes revealed by cryo-EM.

Laura Pieri, Fengbin Wang, Ana-Andreea Arteni, Matthijn Vos, Jean-Marie Winter, Marie-Hélène Le Du, Franck Artzner, Frédéric Gobeaux, Pierre Legrand, Yves Boulard and 3 more

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Helical reconstruction, again.Current opinion in structural biology · 2024
    Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Review
  15. Hollow Octadecameric Self-Assembly of Collagen-like Peptides.Journal of the American Chemical Society · 2023
    Article
  16. Article
  17. Polymorphism in peptide self-assembly visualized.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

13 authors.

Laura PieriCEA, CNRS, Université Paris-Saclay, Institute for Integrative Biology of the Cell (I2BC), 91198 Gif-sur-Yvette, France.
Fengbin WangDepartment of Biochemistry and Molecular Genetics, School of Medicine, University of Virginia, Charlottesville, VA 22908.
Ana-Andreea ArteniCEA, CNRS, Université Paris-Saclay, Institute for Integrative Biology of the Cell (I2BC), 91198 Gif-sur-Yvette, France.
Matthijn VosNanoimaging Core Facility, Institut Pasteur, 75015 Paris, France.
Jean-Marie WinterNanoimaging Core Facility, Institut Pasteur, 75015 Paris, France.
Marie-Hélène Le DuCEA, CNRS, Université Paris-Saclay, Institute for Integrative Biology of the Cell (I2BC), 91198 Gif-sur-Yvette, France.
Franck ArtznerInstitute de Physique de Rennes, Université Rennes 1, 35000 Rennes, France.ORCID 0000-0002-5613-576X
Frédéric GobeauxCEA, CNRS, Université Paris-Saclay, Institute for Integrative Biology of the Cell (I2BC), 91198 Gif-sur-Yvette, France.
Pierre LegrandSynchrotron SOLEIL, 91192 Gif-sur Yvette, France.ORCID 0000-0003-2431-2255
Yves BoulardCEA, CNRS, Université Paris-Saclay, Institute for Integrative Biology of the Cell (I2BC), 91198 Gif-sur-Yvette, France.
Stéphane BressanelliCEA, CNRS, Université Paris-Saclay, Institute for Integrative Biology of the Cell (I2BC), 91198 Gif-sur-Yvette, France.ORCID 0000-0002-0921-6727
Edward H EgelmanDepartment of Biochemistry and Molecular Genetics, School of Medicine, University of Virginia, Charlottesville, VA 22908; egelman@virginia.edu maite.paternostre@i2bc.paris-saclay.fr.ORCID 0000-0003-4844-5212
Maité PaternostreCEA, CNRS, Université Paris-Saclay, Institute for Integrative Biology of the Cell (I2BC), 91198 Gif-sur-Yvette, France; egelman@virginia.edu maite.paternostre@i2bc.paris-saclay.fr.

Funding

Cryo-EM of Helical Protein and Nucleoprotein Polymers at Near Atomic ResolutionR35GM122510 · NIGMS · UNIVERSITY OF VIRGINIA · PI EDWARD H. EGELMAN · 2017 to 2026
$7.3M
Understanding and using microbial conductive nanowiresK99GM138756 · NIGMS · UNIVERSITY OF VIRGINIA · PI WANG, FENGBIN · 2021 to 2022
$130k
NIGMS NIH HHS K99 GM138756NIGMS NIH HHS R35 GM122510
6 · The paper itself

Abstract

Functional and versatile nano- and microassemblies formed by biological molecules are found at all levels of life, from cell organelles to full organisms. Understanding the chemical and physicochemical determinants guiding the formation of these assemblies is crucial not only to understand the biological processes they carry out but also to mimic nature. Among the synthetic peptides forming well-defined nanostructures, the octapeptide Lanreotide has been considered one of the best characterized, in terms of both the atomic structure and its self-assembly process. In the present work, we determined the atomic structure of Lanreotide nanotubes at 2.5-Å resolution by cryoelectron microscopy (cryo-EM). Surprisingly, the asymmetric unit in the nanotube contains eight copies of the peptide, forming two tetramers. There are thus eight different environments for the peptide, and eight different conformations in the nanotube. The structure built from the cryo-EM map is strikingly different from the molecular model, largely based on X-ray fiber diffraction, proposed 20 y ago. Comparison of the nanotube with a crystal structure at 0.83-Å resolution of a Lanreotide derivative highlights the polymorphism for this peptide family. This work shows once again that higher-order assemblies formed by even well-characterized small peptides are very difficult to predict.

Indexed as

Cryoelectron MicroscopyModels, MolecularNanotubesPeptidesPeptides, CyclicSomatostatinX-Ray DiffractionlanreotidePeptidesPeptides, CyclicSomatostatinhelical polymerspeptide assembliesthree-dimensional reconstruction

Identifiers

PMID35042822
PMCPMC8794822

What OpenQuestion holds

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LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.