Evidence map›Paper›PMID 35042800›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2022

The Earth BioGenome Project 2020: Starting the clock.

Harris A Lewin, Stephen Richards, Erez Lieberman Aiden, Miguel L Allende, John M Archibald, Miklós Bálint, Katharine B Barker, Bridget Baumgartner, Katherine Belov, Giorgio Bertorelle and 75 more

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 189 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
189citing papers in PubMed, 3 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

189 citing papers in PubMed, 3 syntheses or guidelines pooled it.

  1. Guideline
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  8. Variant calling in nonmodel organisms with snpArcher.Molecular biology and evolution · 2026
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129 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

85 authors.

Harris A LewinDepartment of Evolution and Ecology, College of Biological Sciences, University of California, Davis, CA 95616; lewin@ucdavis.edu.ORCID 0000-0002-1043-7287
Stephen RichardsUniversity of California Davis Genome Center, University of California, Davis, CA 95616.ORCID 0000-0001-8959-5466
Erez Lieberman AidenDNA Zoo and The Center for Genome Architecture, Baylor College of Medicine, Houston, TX 77030.
Miguel L AllendeCenter for Genome Regulation, Universidad de Chile 3425 Santiago, Chile.ORCID 0000-0002-2783-2152
John M ArchibaldDepartment of Biochemistry & Molecular Biology, Dalhousie University, Halifax, NS B3H 4H7, Canada.
Miklós BálintLOEWE Centre of Translational Biodiversity Genomics, Senckenberg Leibniz Institution for Biodiversity and Earth System Research 60325 Frankfurt am Main, Germany.
Katharine B BarkerGlobal Genome Biodiversity Network Secretariat, National Museum of Natural History, Smithsonian Institution, Washington, DC 20560.
Bridget BaumgartnerRevive & Restore, Sausalito, CA 94965.
Katherine BelovSchool of Life and Environmental Sciences, University of Sydney, Sydney, NSW 2006, Australia.
Giorgio BertorelleDepartment of Life Sciences and Biotechnology, University of Ferrara 44121 Ferrara, Italy.
Mark L BlaxterTree of Life, Wellcome Sanger Institute, Cambridge CB10 1SA, United Kingdom.ORCID 0000-0003-2861-949X
Jing CaiSchool of Ecology and Environment, Northwestern Polytechnical University 710072 Xi'an, China.
Nicolette D CaperelloUniversity of California Davis Genome Center, University of California, Davis, CA 95616.
Keith CarlsonThe Novim Group, University of California, Santa Barbara, CA 93106.
Juan Carlos Castilla-RubioSpacetime Ventures 05449-050 São Paulo, Brazil.
Shu-Miaw ChawBiodiversity Research Center, Academia Sinica 11529 Taipei, Taiwan.
Lei ChenSchool of Ecology and Environment, Northwestern Polytechnical University 710072 Xi'an, China.
Anna K ChildersBee Research Laboratory, Beltsville Agricultural Research Center, US Department of Agriculture, Agriculture Research Service, Beltsville, MD 20705.
Jonathan A CoddingtonGlobal Genome Initiative, National Museum of Natural History, Smithsonian Institution, Washington, DC 20560.ORCID 0000-0001-6004-7730
Dalia A CondeConservation Science, Species360 Conservation Science Alliance, Bloomington, MN 55425.ORCID 0000-0002-7923-8163
Montserrat CorominasDepartment of Genetics, Microbiology, and Statistics, Universitat de Barcelona 08028 Barcelona, Spain.ORCID 0000-0002-0724-8346
Keith A CrandallDepartment of Biostatistics & Bioinformatics, Computational Biology Institute, George Washington University, Washington, DC 20052.ORCID 0000-0002-0836-3389
Andrew J CrawfordDepartment of Biological Sciences, Universidad de los Andes 111711 Bogotá, Colombia.
Federica DiPalmaGenome British Columbia, Vancouver, BC V5Z 0C4, Canada.
Richard DurbinDepartment of Genetics, University of Cambridge, Cambridge CB2 3EH, United Kingdom.ORCID 0000-0002-9130-1006
ThankGod E EbenezerUniProt, European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Cambridge CB10 1SD, United Kingdom.
Scott V EdwardsDepartment of Organismic and Evolutionary Biology, Harvard University, Cambridge, MA 02138.ORCID 0000-0003-2535-6217
Olivier FedrigoLaboratory of the Neurogenetics of Language, The Rockefeller University, New York, NY 10065.
Paul FlicekWellcome Sanger Institute, Cambridge CB10 1SA, United Kingdom.
Giulio FormentiVertebrate Genome Laboratory, The Rockefeller University, New York, NY 10065.
Richard A GibbsHuman Genome Sequencing Center, Baylor College of Medicine, Houston, TX 77030.
M Thomas P GilbertGLOBE Institute, University of Copenhagen 1350 Copenhagen, Denmark.ORCID 0000-0002-5805-7195
Melissa M GoldsteinDepartment of Health Policy and Management, George Washington University, Washington, DC 20052.
Jennifer Marshall GravesSchool of Life Sciences, La Trobe University, Bundoora, VIC 3086, Australia.ORCID 0000-0001-6480-7856
Henry T GreelyStanford Law School, Stanford University, Stanford, CA 94305.ORCID 0000-0002-1105-6734
Igor V GrigorievUS Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA 94720.ORCID 0000-0002-3136-8903
Kevin J HackettOffice of National Programs, US Department of Agriculture, Agricultural Research Service, Beltsville, MD 20705.
Neil HallEarlham Institute, Norwich Research Park, Norwich NR4 7UZ, United Kingdom.
David HausslerGenome Institute, University of California, Santa Cruz, CA 95060.
Kristofer M HelgenAustralian Museum Research Institute, Australian Museum, Sydney, NSW 2000, Australia.
Carolyn J HoggSchool of Life and Environmental Sciences, University of Sydney, Sydney, NSW 2006, Australia.ORCID 0000-0002-6328-398X
Sachiko IsobeDepartment of Frontier Research and Development, Kazusa DNA Research Institute, Chiba 292-0818, Japan.
Kjetill Sigurd JakobsenDepartment of Biosciences, University of Oslo, Oslo 0316, Norway.ORCID 0000-0002-8861-5397
Axel JankeLOEWE Centre of Translational Biodiversity Genomics, Senckenberg Leibniz Institution for Biodiversity and Earth System Research 60325 Frankfurt am Main, Germany.ORCID 0000-0002-9394-1904
Erich D JarvisLaboratory of the Neurogenetics of Language, The Rockefeller University, New York, NY 10065.
Warren E JohnsonWalter Reed Biosystematics Unit, Smithsonian Institution, Suitland, MD 20746.ORCID 0000-0002-5954-186X
Steven J M JonesCanada's Michael Smith Genome Sciences Centre, BC Cancer, Vancouver, BC V5Z 4S6, Canada.
Elinor K KarlssonBioinformatics and Integrative Biology, University of Massachusetts Medical School, Worcester, MA 01605.ORCID 0000-0002-4343-3776
Paul J KerseyRoyal Botanic Gardens, Kew, Richmond TW9 3AE, United Kingdom.
Jin-Hyoung KimDivision of Life Sciences, Korea Polar Research Institute 21990 Incheon, South Korea.
W John KressMuseum of Natural History, Smithsonian Institution, Washington, DC 20013-7012.ORCID 0000-0002-0140-5267
Shigehiro KurakuDepartment of Genomics and Evolutionary Biology, National Institute of Genetics 411-8540 Shizuoka, Japan.
Mara K N LawniczakTree of Life, Wellcome Sanger Institute, Cambridge CB10 1SA, United Kingdom.
James H Leebens-MackDepartment of Plant Biology, University of Georgia, Athens, GA 30602.ORCID 0000-0003-4811-2231
Xueyan LiState Key Laboratory of Genetic Resources and Evolution, Kunming Institute of Zoology, Chinese Academy of Sciences 650223 Yunnan, China.
Kerstin Lindblad-TohBroad Institute of MIT and Harvard, Cambridge, MA 02142.ORCID 0000-0001-8338-0253
Xin LiuBGI-Research, Beijing Genomics Institute-Shenzhen 518083 Shenzhen, China.
Jose V LopezDepartment of Biological Sciences, Halmos College of Arts and Sciences, Nova Southeastern University, Dania Beach, FL 33004.
Tomas Marques-BonetInstitute of Evolutionary Biology, Pompeu Fabra University, Consejo Superior de Investigaciones Cientificas, Parc de Recerca Biomedica de Barcelona 08003 Barcelona, Spain.ORCID 0000-0002-5597-3075
Sophie MazardBioplatforms Australia, Macquarie University, Sydney, NSW 2109, Australia.
Jonna A K MazetOne Health Institute, University of California Davis, CA 95616.ORCID 0000-0002-8712-5951
Camila J MazzoniBerlin Center for Genomics in Biodiversity Research 14195 Berlin, Germany.
Eugene W MyersMax Planck Institute for Molecular Cell Biology and Genetics 01307 Dresden, Germany.ORCID 0000-0002-6580-7839
Rachel J O'NeillInstitute for Systems Genomics, University of Connecticut, Storrs, CT 06269.
Sadye PaezLaboratory of the Neurogenetics of Language, The Rockefeller University, New York, NY 10065.
Hyun ParkDivision of Biotechnology, Korea University 02841 Seoul, Korea.
Gene E RobinsonDepartment of Entomology, Carl R. Woese Institute for Genomic Biology, University of Illinois at Urbana-Champaign, Urbana, IL 61801.ORCID 0000-0003-4828-4068
Cristina RoquetSystematics and Evolution of Vascular Plants Associated Unit to Consejo Superior de Investigaciones Cientificas, Departament de Biologia Animal, Biologia Vegetal i Ecologia, Universitat Autònoma de Barcelona 08193 Bellaterra, Spain.ORCID 0000-0001-8748-3743
Oliver A RyderConservation Genetics, San Diego Zoo Wildlife Alliance, Escondido, CA 92027.ORCID 0000-0003-2427-763X
Jamal S M SabirDepartment of Biological Sciences, Faculty of Science, King Abdulaziz University 21589 Jeddah, Saudi Arabia.ORCID 0000-0003-4785-9894
H Bradley ShafferLa Kretz Center for California Conservation Science, Institute of Environment and Sustainability, University of California, Los Angeles, CA 90024.ORCID 0000-0002-5795-9242
Timothy M ShankBiology Department, Woods Hole Oceanographic Institution, Woods Hole, MA 02543.
Jacob S SherkowDepartment of Entomology, Carl R. Woese Institute for Genomic Biology, University of Illinois at Urbana-Champaign, Urbana, IL 61801.ORCID 0000-0002-9724-9261
Pamela S SoltisFlorida Museum of Natural History, University of Florida, Gainesville, FL 32611.ORCID 0000-0001-9310-8659
Boping TangJiangsu Key Laboratory for Bioresources of Saline Soils, Jiangsu Provincial Key Laboratory of Coastal Wetland Bioresources and Environmental Protection, Jiangsu Synthetic Innovation Center for Coastal Bio-agriculture, School of Wetlands, Yancheng Teachers University 224002 Yancheng, China.ORCID 0000-0002-3241-7914
Leho TedersooCenter of Mycology and Microbiology, University of Tartu 50411 Tartu, Estonia.
Marcela Uliano-SilvaTree of Life, Wellcome Sanger Institute, Cambridge CB10 1SA, United Kingdom.
Kun WangSchool of Ecology and Environment, Northwestern Polytechnical University 710072 Xi'an, China.
Xiaofeng WeiBGI-Research, Beijing Genomics Institute-Shenzhen 518083 Shenzhen, China.
Regina WetzerResearch and Collections, Natural History Museum of Los Angeles County, Los Angeles, CA 90007.
Julia L WilsonWellcome Sanger Institute, Cambridge CB10 1SA, United Kingdom.
Xun XuBGI-Research, Beijing Genomics Institute-Shenzhen 518083 Shenzhen, China.
Huanming YangBGI-Research, Beijing Genomics Institute-Shenzhen 518083 Shenzhen, China.
Anne D YoderDepartment of Biology, Duke University, Durham, NC 27708.ORCID 0000-0002-1781-9552
Guojie ZhangState Key Laboratory of Genetic Resources and Evolution, Kunming Institute of Zoology, Chinese Academy of Sciences 650223 Yunnan, China.ORCID 0000-0001-6860-1521

Funding

The Role of Retroelements in Centromere FunctionR01GM123312 · NIGMS · UNIVERSITY OF CONNECTICUT STORRS · PI O'NEILL, RACHEL · 2019 to 2022
$1.9M
Development and Utilization of Splice-specific AntibodiesR21CA240199 · NCI · UNIVERSITY OF CONNECTICUT STORRS · PI O'NEILL, RACHEL · 2019 to 2021
$549k
Wellcome Trust 207492/Z/17/Z
6 · The paper itself

Abstract

PubMed holds no abstract for this paper.

Indexed as

AnimalsBase SequenceBiodiversityEukaryotaGenomicsHumans

Identifiers

PMID35042800
PMCPMC8795548

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.