Evidence map›Paper›PMID 35042532›Full record

ArticleBMC veterinary research2022

Development of a one-step multiplex qRT-PCR assay for the detection of African swine fever virus, classical swine fever virus and atypical porcine pestivirus.

Huixin Liu, Kaichuang Shi, Jing Zhao, Yanwen Yin, Yating Chen, Hongbin Si, Sujie Qu, Feng Long, Wenjun Lu

Open access · goldAbstract read
In one paragraph

Article in BMC veterinary research, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed, 1 pooled it
7.8field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 1 synthesis or guideline pooled it, 35 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Huixin Liu *College of Animal Science and Technology, Guangxi University, Nanning, 530005, China.
Kaichuang Shi *College of Animal Science and Technology, Guangxi University, Nanning, 530005, China. shikaichuang@126.com.
Jing ZhaoCollege of Animal Science and Technology, Guangxi University, Nanning, 530005, China.
Yanwen YinGuangxi Center for Animal Disease Control and Prevention, Nanning, 530001, China.
Yating ChenCollege of Animal Science and Technology, Guangxi University, Nanning, 530005, China.
Hongbin SiCollege of Animal Science and Technology, Guangxi University, Nanning, 530005, China. shb2009@gxu.edu.cn.
Sujie QuGuangxi Center for Animal Disease Control and Prevention, Nanning, 530001, China.
Feng LongGuangxi Center for Animal Disease Control and Prevention, Nanning, 530001, China.
Wenjun LuGuangxi Center for Animal Disease Control and Prevention, Nanning, 530001, China.
Guangxi University · CNGuangxi Center for Disease Prevention and Control · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundAfrican swine fever virus (ASFV), classical swine fever virus (CSFV) and atypical porcine pestivirus (APPV) have caused great economic losses to the swine industry in China. Since coinfections of ASFV, CSFV and APPV occur in certain pig herds, it is necessary to accurately and differentially detect these pathogens in field-collected samples. In this study, a one-step multiplex real-time quantitative reverse transcription-polymerase chain reaction (multiplex qRT-PCR) was developed for the simultaneous and differential detection of ASFV, CSFV and APPV.

resultsThe one-step multiplex qRT-PCR presented here was able to simultaneously detect ASFV, CSFV and APPV but could not amplify other viruses, including porcine circovirus type 2 (PCV2), pseudorabies virus (PRV), porcine reproductive and respiratory syndrome virus (PRRSV), foot-and-mouth disease virus (FMDV), porcine parvovirus (PPV), porcine epidemic diarrhoea virus (PEDV), transmissible gastroenteritis virus (TGEV), porcine rotavirus (PRoV), porcine deltacoronavirus (PDCoV), border disease virus (BDV), bovine viral diarrhoea virus type 1 (BVDV-1), BVDV-2, etc. The limit of detection (LOD) of the assay was 2.52 × 10

conclusionA one-step multiplex qRT-PCR with high specificity, sensitivity and repeatability was successfully developed for the simultaneous and differential detection of ASFV, CSFV and APPV.

Indexed as

African Swine Fever VirusClassical Swine FeverClassical Swine Fever VirusPestivirusReverse Transcriptase Polymerase Chain ReactionSwine DiseasesAnimalsChinaPhylogenySensitivity and SpecificitySwine

Identifiers

PMID35042532
PMCPMC8764768
OpenAlexW4205804701

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.