ArticleJournal of computational biology : a journal of computational molecular cell biology2022
Finding Maximal Exact Matches Using the r-Index.
Article in Journal of computational biology : a journal of computational molecular cell biology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.
What it found
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
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Who cites it
5 citing papers in PubMed.
- Formal verification of bioinformatics software using model checking and theorem proving.Briefings in bioinformatics · 2025Article
- Exploiting uniqueness: seed-chain-extend alignment on elastic founder graphs.Bioinformatics (Oxford, England) · 2025Article
- Heuristics for the run-length encoded Burrows-Wheeler transform alphabet ordering problem.Journal of heuristics · 2025Article
- Suffix sorting via matching statistics.Algorithms for molecular biology : AMB · 2024Article
- Finding maximal exact matches in graphs.Algorithms for molecular biology : AMB · 2024Article
Corrections and comments
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Authors and funding
6 authors.
Funding
Abstract
Efficiently finding maximal exact matches (MEMs) between a sequence read and a database of genomes is a key first step in read alignment. But until recently, it was unknown how to build a data structure in [Formula: see text] space that supports efficient MEM finding, where
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Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.