Evidence map›Paper›PMID 35039860›Full record

ArticleThe Journal of infectious diseases2022

Estimating Tuberculosis Transmission Risks in a Primary Care Clinic in South Africa: Modeling of Environmental and Clinical Data.

Kathrin Zürcher, Julien Riou, Carl Morrow, Marie Ballif, Anastasia Koch, Simon Bertschinger, Digby F Warner, Keren Middelkoop, Robin Wood, Matthias Egger and 1 more

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of infectious diseases, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.5field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 13 citations in OpenAlex.

  1. Article
  2. Infection prevention and control measures during the COVID-19 pandemic and airborne tuberculosis transmission during primary care visits in South Africa.International journal of infectious diseases : IJID : official publication of the International Society for Infectious Diseases · 2025
    Article
  3. Article
  4. Article
  5. Article
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  7. Article
  8. Caring for Adolescents and Young Adults With Tuberculosis or at Risk of Tuberculosis: Consensus Statement From an International Expert Panel.The Journal of adolescent health : official publication of the Society for Adolescent Medicine · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 3 countries.

Kathrin ZürcherInstitute of Social and Preventive Medicine, University of Bern, Bern, Switzerland.
Julien RiouInstitute of Social and Preventive Medicine, University of Bern, Bern, Switzerland.
Carl MorrowInstitute of Infectious Disease and Molecular Medicine, University of Cape Town, Cape Town, South Africa.
Marie BallifInstitute of Social and Preventive Medicine, University of Bern, Bern, Switzerland.
Anastasia KochSouth African Medical Research Council/National Health Laboratory Service/University of Cape Town Molecular Mycobacteriology Research Unit and Department of Science and Innovation/National Research Foundation Centre of Excellence for Biomedical TB Research, Department of Pathology, Faculty of Health Sciences, University of Cape Town, Cape Town, South Africa.
Simon BertschingerInstitute of Social and Preventive Medicine, University of Bern, Bern, Switzerland.
Digby F WarnerInstitute of Infectious Disease and Molecular Medicine, University of Cape Town, Cape Town, South Africa.
Keren MiddelkoopInstitute of Infectious Disease and Molecular Medicine, University of Cape Town, Cape Town, South Africa.
Robin WoodInstitute of Infectious Disease and Molecular Medicine, University of Cape Town, Cape Town, South Africa.
Matthias EggerInstitute of Social and Preventive Medicine, University of Bern, Bern, Switzerland.
Lukas FennerInstitute of Social and Preventive Medicine, University of Bern, Bern, Switzerland.
Institute of Social and Preventive Medicine · CHUniversity of Bern · CHDesmond Tutu HIV Foundation · ZAUniversity of Cape Town · ZANational Health Laboratory Service · ZA

Funding

Observational Antiretroviral Studies In Southern Africa (OASIS) CollaborationU01AI069924 · NIAID · UNIVERSITAT BERN · PI Cleophas Chimbetete, Mary-Ann Davies · 2006 to 2026
$55.9M
NIAID NIH HHS U01 AI069924
6 · The paper itself

Abstract

backgroundCongregate settings, such as healthcare clinics, may play an essential role in Mycobacterium tuberculosis (Mtb) transmission. Using patient and environmental data, we studied transmission at a primary care clinic in South Africa.

methodsWe collected patient movements, cough frequency, and clinical data, and measured indoor carbon dioxide (CO2) levels, relative humidity, and Mtb genomes in the air. We used negative binomial regression model to investigate associations.

resultsWe analyzed 978 unique patients who contributed 14 795 data points. The median patient age was 33 (interquartile range [IQR], 26-41) years, and 757 (77.4%) were female. Overall, median CO2 levels were 564 (IQR 495-646) parts per million and were highest in the morning. Median number of coughs per day was 466 (IQR, 368-503), and overall median Mtb DNA copies/μL/day was 4.2 (IQR, 1.2-9.5). We found an increased presence of Mtb DNA in the air of 32% (95% credible interval, 7%-63%) per 100 additional young adults (aged 15-29 years) and 1% (0-2%) more Mtb DNA per 10% increase of relative humidity. Estimated cumulative transmission risks for patients attending the clinic monthly for at least 1 hour range between 9% and 29%.

conclusionsWe identified young adults and relative humidity as potentially important factors for transmission risks in healthcare clinics. Our approach should be used to detect transmission and evaluate infection control interventions.

Indexed as

Mycobacterium tuberculosisTuberculosisCarbon DioxideFemaleHumansMalePrimary Health CareSouth AfricaYoung AdultCarbon Dioxidebiosamplingcarbon dioxidecoughhumidityinfection controlinterventionMycobacterium tuberculosisprimary care clinictransmissiontuberculosis

Identifiers

PMID35039860
PMCPMC9071349
OpenAlexW4206360293

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.