Evidence map›Paper›PMID 35039539›Full record

ArticleScientific reports2022

Irgm1 regulates metabolism and function in T cell subsets.

Yazan Alwarawrah, Keiko Danzaki, Amanda G Nichols, Brian E Fee, Cheryl Bock, Gary Kucera, Laura P Hale, Gregory A Taylor, Nancie J MacIver

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
1.4field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 19 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Irgm1 Restrains CD8European journal of immunology · 2026
    Article
  6. Review
  7. Macrophages From Latently Infected Mice Have Trained Immunity to HSV-1.Investigative ophthalmology & visual science · 2026
    Article
  8. Article
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  13. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Yazan AlwarawrahDepartment of Pediatrics, Division of Pediatric Endocrinology and Diabetes, University of North Carolina, Chapel Hill, NC, USA.
Keiko DanzakiDepartment of Pediatrics, Division of Pediatric Endocrinology and Diabetes, Duke University Medical Center, Durham, NC, USA.
Amanda G NicholsDepartment of Pediatrics, Division of Pediatric Endocrinology and Diabetes, University of North Carolina, Chapel Hill, NC, USA.
Brian E FeeDepartment of Medicine, Division of Geriatrics, and Center for the Study of Aging and Human Development, Duke University Medical Center, Durham, NC, USA.
Cheryl BockDuke Cancer Institute, Duke University Medical Center, Durham, NC, USA.
Gary KuceraDuke Cancer Institute, Duke University Medical Center, Durham, NC, USA.
Laura P HaleDepartment of Pathology, Duke University Medical Center, Durham, NC, USA.
Gregory A Taylor *Department of Medicine, Division of Geriatrics, and Center for the Study of Aging and Human Development, Duke University Medical Center, Durham, NC, USA. gregory.taylor@duke.edu.
Nancie J MacIver *Department of Pediatrics, Division of Pediatric Endocrinology and Diabetes, University of North Carolina, Chapel Hill, NC, USA. nancie_maciver@med.unc.edu.
Duke Medical Center · USUniversity of North Carolina at Chapel Hill · USDuke University · US

Funding

UNIV OF NORTH CAROLINA CLINICAL NUTRITION RESEARCH UNITP30DK056350 · NIDDK · UNIV OF NORTH CAROLINA CHAPEL HILL · PI Ian Michael Carroll · 1999 to 2026
$31.6M
MEDICAL SCIENTIST TRAINING PROGRAMT32GM007171 · NIGMS · DUKE UNIVERSITY · PI KONTOS, CHRISTOPHER D · 1985 to 2021
$31.2M
Vanderbilt Clinical Oncology Research Career Development ProgramK12CA090625 · NCI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI Debra L. Friedman, Paula Jill Hurley · 2001 to 2026
$16.9M
IRGM proteins as regulators of inflammationR01AI148243 · NIAID · DUKE UNIVERSITY · PI COERS, JOERN, TAYLOR, GREGORY A · 2020 to 2024
$2.4M
Role of IRGM proteins in immunity to enteric bacteriaR01AI145929 · NIAID · DUKE UNIVERSITY · PI TAYLOR, GREGORY A · 2019 to 2023
$1.6M
Leptin as a Regulator of T Cell Metabolism and FunctionK08DK087944 · NIDDK · DUKE UNIVERSITY · PI MACIVER, NANCIE · 2010 to 2014
$678k
Regulation of T cell metabolism and function by IRGM proteinsR21AI135398 · NIAID · DUKE UNIVERSITY · PI MACIVER, NANCIE, TAYLOR, GREGORY A · 2019 to 2020
$442k
Metabolic reprogramming to improve EGFRvIII CAR T cell persistenceR21CA253163 · NCI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI MACIVER, NANCIE · 2021 to 2022
$402k
Regulation of Intestinal Inflammation by Irgm1I01BX002369 · VA · DURHAM VA MEDICAL CENTER · PI TAYLOR, GREGORY A · 2015 to 2018
–
BLRD VA I01 BX002369National Institute of Allergy and Infectious Diseases AI135398NCI NIH HHS K12 CA090625NCI NIH HHS R21 CA253163NIAID NIH HHS R01 AI145929NIAID NIH HHS R01 AI148243NIAID NIH HHS R21 AI135398NIDDK NIH HHS K08 DK087944NIDDK NIH HHS P30 DK056350NIGMS NIH HHS T32 GM007171
6 · The paper itself

Abstract

Immunity Related GTPases (IRG) are a family of proteins produced during infection that regulate membrane remodeling events in cells, particularly autophagy and mitophagy. The human IRGM gene has been strongly associated with Crohn's disease and other inflammatory diseases through Genome-Wide Association studies. Absence of Irgm1 in mice prompts intestinal inflammation, autoimmunity, and impaired immune control of pathogenic bacteria and protozoa. Although prior work has focused on a prominent role for IRGM/Irgm1 in regulating macrophage function, the work described here addresses a potential role of Irgm1 in regulating the function of mature T cells. Irgm1 was found to be highly expressed in T cells in a manner that varied with the particular T cell subset and increased with activation. Mice with a complete lack of Irgm1, or a conditional lack of Irgm1 specifically in T cells, displayed numerous changes in T cell numbers and function in all subsets examined, including CD4

Indexed as

AnimalsApoptosisAutophagyCD4-Positive T-LymphocytesCD8-Positive T-LymphocytesCells, CulturedGene ExpressionGlucoseGlycolysisGTP-Binding ProteinsLymphocyte ActivationMiceMice, Inbred C57BLMice, TransgenicT-Lymphocyte SubsetsGlucoseGTP-Binding ProteinsIfi1 protein, mouse

Identifiers

PMID35039539
PMCPMC8763923
OpenAlexW4205333667

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.