Evidence map›Paper›PMID 35038993›Full record

ArticleBMC plant biology2022

Analyses of key gene networks controlling carotenoid metabolism in Xiangfen 1 banana.

Chen Dong, Jiuxiang Wang, Yulin Hu, Weijun Xiao, Huigang Hu, Jianghui Xie

Abstract read
In one paragraph

Article in BMC plant biology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. 15-Foods (Basel, Switzerland) · 2024
    Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Chen Dong *South Subtropical Crop Research Institute, Chinese Academy of Tropical Agricultural Science/ Key Laboratory of Tropical Fruit Biology, Ministry of Agriculture/Key Laboratory of Hainan Province for Postharvest Physiology and Technology of Tropical Horticultural Products, Zhanjiang, Guangdong, 524091, China.
Jiuxiang Wang *South Subtropical Crop Research Institute, Chinese Academy of Tropical Agricultural Science/ Key Laboratory of Tropical Fruit Biology, Ministry of Agriculture/Key Laboratory of Hainan Province for Postharvest Physiology and Technology of Tropical Horticultural Products, Zhanjiang, Guangdong, 524091, China.
Yulin HuSouth Subtropical Crop Research Institute, Chinese Academy of Tropical Agricultural Science/ Key Laboratory of Tropical Fruit Biology, Ministry of Agriculture/Key Laboratory of Hainan Province for Postharvest Physiology and Technology of Tropical Horticultural Products, Zhanjiang, Guangdong, 524091, China.
Weijun XiaoSouth Subtropical Crop Research Institute, Chinese Academy of Tropical Agricultural Science/ Key Laboratory of Tropical Fruit Biology, Ministry of Agriculture/Key Laboratory of Hainan Province for Postharvest Physiology and Technology of Tropical Horticultural Products, Zhanjiang, Guangdong, 524091, China.
Huigang HuSouth Subtropical Crop Research Institute, Chinese Academy of Tropical Agricultural Science/ Key Laboratory of Tropical Fruit Biology, Ministry of Agriculture/Key Laboratory of Hainan Province for Postharvest Physiology and Technology of Tropical Horticultural Products, Zhanjiang, Guangdong, 524091, China. huhuigang@sina.com.
Jianghui XieSouth Subtropical Crop Research Institute, Chinese Academy of Tropical Agricultural Science/ Key Laboratory of Tropical Fruit Biology, Ministry of Agriculture/Key Laboratory of Hainan Province for Postharvest Physiology and Technology of Tropical Horticultural Products, Zhanjiang, Guangdong, 524091, China. 313972374@qq.com.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundBanana fruits are rich in various high-value metabolites and play a key role in the human diet. Of these components, carotenoids have attracted considerable attention due to their physiological role and human health care functions. However, the accumulation patterns of carotenoids and genome-wide analysis of gene expression during banana fruit development have not been comprehensively evaluated.

resultsIn the present study, an integrative analysis of metabolites and transcriptome profiles in banana fruit with three different development stages was performed. A total of 11 carotenoid compounds were identified, and most of these compounds showed markedly higher abundances in mature green and/or mature fruit than in young fruit. Results were linked to the high expression of carotenoid synthesis and regulatory genes in the middle and late stages of fruit development. Co-expression network analysis revealed that 79 differentially expressed transcription factor genes may be responsible for the regulation of LCYB (lycopene β-cyclase), a key enzyme catalyzing the biosynthesis of α- and β-carotene.

conclusionsCollectively, the study provided new insights into the understanding of dynamic changes in carotenoid content and gene expression level during banana fruit development.

Indexed as

Gene Regulatory NetworksTranscriptomebeta CaroteneCarotenoidsFruitGene Expression Regulation, PlantGene OntologyIntramolecular LyasesMusaPlant ProteinsTranscription Factorsbeta CaroteneCarotenoidsIntramolecular Lyaseslycopene cyclase-isomerasePlant ProteinsTranscription FactorsBananaCarotenoid compoundsDevelopmental periodGene networks

Identifiers

PMID35038993
PMCPMC8762954

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.