Evidence map›Paper›PMID 35038602›Full record

ArticleInternational journal of infectious diseases : IJID : official publication of the International Society for Infectious Diseases2022

Viral co-pathogens in COVID-19 acute respiratory syndrome - what did we learn from the first year of pandemic?

Or Kriger, Shiraz Gefen-Halevi, Eyal Leshem, Gillian Smollan, Natasha Belausov, Aseel Egbarye, Rawan Khashab, Miran Odeh, Adleen Saffia, Yuval Barak and 9 more

Open access · goldAbstract read
In one paragraph

Article in International journal of infectious diseases : IJID : official publication of the International Society for Infectious Diseases, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed, 1 pooled it
0.8field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 1 synthesis or guideline pooled it, 5 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors at 3 institutions in 1 country.

Or KrigerSheba Medical Center, Ramat-Gan, Israel. Electronic address: or.kriger@sheba.health.gov.il.
Shiraz Gefen-HaleviSheba Medical Center, Ramat-Gan, Israel.
Eyal LeshemSheba Medical Center, Ramat-Gan, Israel; Sackler Faculty of Medicine, Tel Aviv University, Tel Aviv, Israel.
Gillian SmollanSheba Medical Center, Ramat-Gan, Israel.
Natasha BelausovSheba Medical Center, Ramat-Gan, Israel.
Aseel EgbaryeSheba Medical Center, Ramat-Gan, Israel.
Rawan KhashabSheba Medical Center, Ramat-Gan, Israel.
Miran OdehSheba Medical Center, Ramat-Gan, Israel.
Adleen SaffiaSheba Medical Center, Ramat-Gan, Israel.
Yuval BarakSheba Medical Center, Ramat-Gan, Israel.
Oswa Abu HusseinSheba Medical Center, Ramat-Gan, Israel.
Rachel HamiasSheba Medical Center, Ramat-Gan, Israel.
Yael AharonSheba Medical Center, Ramat-Gan, Israel.
Jacqueline AlfandariSheba Medical Center, Ramat-Gan, Israel.
Ital NemetCentral Virology Laboratory, Ministry of Health, Ramat-Gan, Israel.
Limor KlikerCentral Virology Laboratory, Ministry of Health, Ramat-Gan, Israel.
Hilda SherbanyCentral Virology Laboratory, Ministry of Health, Ramat-Gan, Israel.
Michal MandelboimCentral Virology Laboratory, Ministry of Health, Ramat-Gan, Israel; Sackler Faculty of Medicine, Tel Aviv University, Tel Aviv, Israel.
Sharon AmitSheba Medical Center, Ramat-Gan, Israel.
Sheba Medical Center · ILIsrael Ministry of Health · ILTel Aviv University · IL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

objectiveThis study aimed to describe the distribution of respiratory pathogens and the occurrence of co-pathogens during the first year of the COVID-19 pandemic.

methodsWe used a multiplex polymerase chain reaction (PCR) panel targeting 23 microorganisms to analyze the oro-pharyngeal samples of patients admitted to our hospital with acute respiratory infection (ARI) between March 1, 2020, and February 28, 2021. We matched 40 to 50 patients who were SARS-CoV-2 positive and SARS-CoV-2 negative per month for age and sex.

resultsA total of 939 patients with multiplex PCR test results were included in the study. Respiratory pathogens where detected in only 8/476 (1.6%) patients with COVID-19 versus 87/463 (18.7%) patients with non-COVID-19 ARI patients. Diversity and rates of pathogens vastly differed from previous years but showed seasonal variance.

conclusionPatients with SARS-CoV-2 infection presenting with ARI during the first year of the COVID-19 pandemic demonstrated paucity of respiratory co-pathogens.

Indexed as

COVID-19Respiratory Tract InfectionsHumansMultiplex Polymerase Chain ReactionPandemicsSARS-CoV-2co-infectionsCOVID-19SARS-CoV-2

Identifiers

PMID35038602
PMCPMC8758566
OpenAlexW4220977234

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.