Evidence map›Paper›PMID 35038379›Full record

ArticleFEBS open bio2022

Lewis fucose is a key moiety for the recognition of histo-blood group antigens by GI.9 norovirus, as revealed by structural analysis.

Tomomi Kimura-Someya, Miyuki Kato-Murayama, Kazushige Katsura, Naoki Sakai, Kazutaka Murayama, Kazuharu Hanada, Mikako Shirouzu, Yuichi Someya

Open access · goldAbstract read
In one paragraph

Article in FEBS open bio, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.7field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 7 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Tomomi Kimura-SomeyaRIKEN Center for Biosystems Dynamics Research, Yokohama, Japan.ORCID 0000-0003-2232-1801
Miyuki Kato-MurayamaRIKEN Center for Biosystems Dynamics Research, Yokohama, Japan.
Kazushige KatsuraRIKEN Center for Biosystems Dynamics Research, Yokohama, Japan.
Naoki SakaiRIKEN Center for Biosystems Dynamics Research, Yokohama, Japan.
Kazutaka MurayamaGraduate School of Biomedical Engineering, Tohoku University, Sendai, Japan.ORCID 0000-0003-1749-4038
Kazuharu HanadaRIKEN Center for Biosystems Dynamics Research, Yokohama, Japan.
Mikako ShirouzuRIKEN Center for Biosystems Dynamics Research, Yokohama, Japan.
Yuichi SomeyaDepartment of Virology II, National Institute of Infectious Diseases, Tokyo, Japan.ORCID 0000-0003-1654-3432
RIKEN Center for Biosystems Dynamics Research · JPNational Institute of Infectious Diseases · JPTohoku University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Noroviruses have been identified as major causative agents of acute nonbacterial gastroenteritis in humans. Histo-blood group antigens (HBGAs) are thought to play a major role among the host cellular factors influencing norovirus infection. Genogroup I, genotype 9 (GI.9) is the most recently identified genotype within genogroup I, whose representative strain is the Vancouver 730 norovirus. However, the molecular interactions between host antigens and the GI.9 capsid protein have not been investigated in detail. In this study, we demonstrate that the GI.9 norovirus preferentially binds Lewis antigens over blood group A, B, and H antigens, as revealed by an HBGA binding assay using virus-like particles. We determined the crystal structures of the protruding domain of the GI.9 capsid protein in the presence or absence of Lewis antigens. Our analysis demonstrated that Lewis fucose (α1-3/4 fucose) represents a key moiety for the GI.9 protein-HBGA interaction, thus suggesting that Lewis antigens might play a critical role during norovirus infection. In addition to previously reported findings, our observations may support the future design of antiviral agents and vaccines against noroviruses.

Indexed as

Blood Group AntigensNorovirusBinding SitesCrystallography, X-RayFucoseHumansModels, MolecularProtein BindingBlood Group AntigensFucosecrystal structurefucosehisto-blood group antigensLewis antigensnorovirusVP1 protein

Identifiers

PMID35038379
PMCPMC8886331
OpenAlexW4206001469

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.