Evidence map›Paper›PMID 35038342›Full record

ArticlePathogens and disease2022

The autophagy-resistant Mycobacterium tuberculosis Beijing strain upregulates KatG to evade starvation-induced autophagic restriction.

Tegar Adriansyah Putra Siregar, Pinidphon Prombutara, Phongthon Kanjanasirirat, Nawapol Kunkaew, Alisa Tubsuwan, Atsadang Boonmee, Tanapat Palaga, Tanawadee Khumpanied, Suparerk Borwornpinyo, Angkana Chaiprasert and 2 more

Open access · hybridAbstract read
In one paragraph

Article in Pathogens and disease, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
  2. Review
  3. TowardMicroorganisms · 2024
    Review
  4. Functional Analysis of Genes inIndian journal of microbiology · 2024
    Review
  5. Review
  6. Article
  7. Eliminating the invading extracellular and intracellular FnBpFrontiers in cellular and infection microbiology · 2023
    Article
  8. Frontiers in cellular and infection microbiology · 2023
    Review
  9. Review
  10. Offense and Defense in Granulomatous Inflammation Disease.Frontiers in cellular and infection microbiology · 2022
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 2 countries.

Tegar Adriansyah Putra SiregarDepartment of Microbiology, Faculty of Science, Mahidol University, Rama VI Road, Bangkok 10400, Thailand.
Pinidphon PrombutaraOmics Sciences and Bioinformatics Center, Faculty of Science, Chulalongkorn University, Phayathai Road, Bangkok 10330, Thailand.
Phongthon KanjanasiriratExcellent Center for Drug Discovery, Faculty of Science, Mahidol University, Ratchawithi Road, Bangkok 10400, Thailand.
Nawapol KunkaewMahidol Vivax Research Unit, Faculty of Tropical Medicine, Mahidol University, Rama VI Road, Bangkok 10400, Thailand.
Alisa TubsuwanInstitute of Molecular Biosciences, Mahidol University, Phuttamonthon 4 Road, Nakhon Pathom 73170, Thailand.
Atsadang BoonmeeDepartment of Microbiology, Faculty of Science, Chulalongkorn University, Phayathai Road, Bangkok 10330, Thailand.
Tanapat PalagaDepartment of Microbiology, Faculty of Science, Chulalongkorn University, Phayathai Road, Bangkok 10330, Thailand.
Tanawadee KhumpaniedExcellent Center for Drug Discovery, Faculty of Science, Mahidol University, Ratchawithi Road, Bangkok 10400, Thailand.
Suparerk BorwornpinyoExcellent Center for Drug Discovery, Faculty of Science, Mahidol University, Ratchawithi Road, Bangkok 10400, Thailand.
Angkana ChaiprasertOffice of Research and Development, Siriraj Hospital, Faculty of Medicine, Mahidol University, Wanglang Rd, Bangkok 10700, Thailand.
Pongsak UtaisincharoenDepartment of Microbiology, Faculty of Science, Mahidol University, Rama VI Road, Bangkok 10400, Thailand.
Marisa PonpuakDepartment of Microbiology, Faculty of Science, Mahidol University, Rama VI Road, Bangkok 10400, Thailand.
Mahidol University · THChulalongkorn University · THSiriraj Hospital · THUniversitas Muhammadiyah Jember · ID

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Mycobacterium tuberculosis utilizes several mechanisms to block phagosome-lysosome fusion to evade host cell restriction. However, induction of host cell autophagy by starvation was shown to overcome this block, resulting in enhanced lysosomal delivery to mycobacterial phagosomes and the killing of the M. tuberculosis reference strain H37Rv. Nevertheless, our previous studies found that strains belonging to the M. tuberculosis Beijing genotype can resist starvation-induced autophagic elimination, though the mycobacterial factors involved remain unclear. In this study, we showed that KatG expression is upregulated in the autophagy-resistant M. tuberculosis Beijing strain (BJN) during autophagy induction by the starvation of host macrophages, while such increase was not observed in the H37Rv. KatG depletion using the CRISPR-dCas9 interference system in the BJN resulted in increased lysosomal delivery to its phagosome and decreased its survival upon autophagy induction by starvation. As KatG functions by catabolizing ROS, we determined the source of ROS contributing to the starvation-induced autophagic elimination of mycobacteria. Using siRNA-mediated knockdown, we found that Superoxide dismutase 2, which generates mitochondrial ROS but not NADPH oxidase 2, is important for the starvation-induced lysosomal delivery to mycobacterial phagosomes. Taken together, these findings showed that KatG is vital for the BJN to evade starvation-induced autophagic restriction.

Indexed as

Mycobacterium tuberculosisAutophagyBeijingLysosomesPhagosomesCRISPRKatGMycobacterium tuberculosisROStuberculosistutophagy

Identifiers

PMID35038342
PMCPMC8829027
OpenAlexW4206084255

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.