Evidence map›Paper›PMID 35036113›Full record

ArticlePeerJ2021

Quantification of antibiotic resistance genes and mobile genetic in dairy manure.

Yi Wang, Pramod Pandey, Colleen Chiu, Richard Jeannotte, Sundaram Kuppu, Ruihong Zhang, Richard Pereira, Bart C Weimer, Nitin Nitin, Sharif S Aly

Open access · goldAbstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in PeerJ, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.3field-weighted citation impact, top 50% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 1 institution in 1 country.

Yi WangDepartment of Population Health and Reproduction, University of California, Davis, Davis, California, United States.ORCID 0000-0003-2830-4754
Pramod PandeyDepartment of Population Health and Reproduction, University of California, Davis, Davis, California, United States.
Colleen ChiuDepartment of Population Health and Reproduction, University of California, Davis, Davis, California, United States.
Richard JeannotteDepartment of Population Health and Reproduction, University of California, Davis, Davis, California, United States.
Sundaram KuppuDepartment of Population Health and Reproduction, University of California, Davis, Davis, California, United States.
Ruihong ZhangDepartment of Biological and Agricultural Engineering, University of California, Davis, Davis, California, United States.
Richard PereiraDepartment of Population Health and Reproduction, University of California, Davis, Davis, California, United States.ORCID 0000-0003-2028-8761
Bart C WeimerDepartment of Population Health and Reproduction, University of California, Davis, Davis, California, United States.ORCID 0000-0002-7471-1978
Nitin NitinDepartment of Food Science and Technology, University of California, Davis, Davis, California, United States.
Sharif S AlyDepartment of Population Health and Reproduction, University of California, Davis, Davis, California, United States.ORCID 0000-0003-0330-5013
University of California, Davis · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundAntibiotic resistance genes (ARGs) are considered to be emerging environmental contaminants of concern potentially posing risks to human and animal health, and this research studied the prevalence of antimicrobial resistance in dairy manure.

methodsThis study is focused on investigating prevalence of ARGs in California dairy farm manure under current common different manure management. A total of 33 manure samples were collected from multiple manure treatment conditions: (1) flushed manure (FM), (2) fresh pile (FP), (3) compost pile (CP), (4) primary lagoon (PL), and (5) secondary lagoon (SL). After DNA extraction, all fecal samples were screened by PCR for the presence of eight ARGs: four sulfonamide ARGs (

resultsPrevalence of genes varied among sample types, but all genes were detectable in different manure types. Results showed that liquid-solid separation, piling, and lagoon conditions had limited effects on reducing ARGs and MGEs, and the effect was only found significant on

Indexed as

Antibiotic resistance genesDairy manureGene sequencingMobile genetic elementsReal-time pcr

Identifiers

PMID35036113
PMCPMC8710253
OpenAlexW4200512742

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.