Evidence map›Paper›PMID 35035611›Full record

Observational studyDisease markers2022

Validation of a Saliva-Based Test for the Molecular Diagnosis of SARS-CoV-2 Infection.

Michela Bulfoni, Emanuela Sozio, Barbara Marcon, Maria De Martino, Daniela Cesselli, Chiara De Carlo, Romina Martinella, Angelica Migotti, Eleonora Vania, Agnese Zanus-Fortes and 5 more

Abstract readObservational StudyValidation Study
In one paragraph

Observational study in Disease markers, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. Review
  4. Article
  5. Article
  6. Review
  7. Validation of RT-qPCR test for SARS-CoV-2 in saliva specimens.Journal of infection and public health · 2022
    Article
  8. Article
  9. Observational
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Michela BulfoniDepartment of Medicine, University of Udine, Udine, Italy.ORCID https://orcid.org/0000-0003-2646-4228
Emanuela SozioInfectious Disease Unit, Department of Medicine, ASU FC, Udine, Italy.
Barbara MarconDepartment of Laboratory Medicine, ASU FC, Udine, Italy.
Maria De MartinoDepartment of Medicine, University of Udine, Udine, Italy.
Daniela CesselliDepartment of Medicine, University of Udine, Udine, Italy.
Chiara De CarloInfectious Disease Unit, Department of Medicine, ASU FC, Udine, Italy.
Romina MartinellaDepartment of Laboratory Medicine, ASU FC, Udine, Italy.
Angelica MigottiDepartment of Laboratory Medicine, ASU FC, Udine, Italy.
Eleonora VaniaInfectious Disease Unit, Department of Medicine, ASU FC, Udine, Italy.
Agnese Zanus-FortesInfectious Disease Unit, Department of Medicine, ASU FC, Udine, Italy.
Jessica De PieroInfectious Disease Unit, Department of Medicine, ASU FC, Udine, Italy.
Emanuele NencioniBiofarma Srl, Mereto di Tomba Udine, Italy.
Carlo TasciniDepartment of Medicine, University of Udine, Udine, Italy.
Miriam IsolaDepartment of Medicine, University of Udine, Udine, Italy.
Francesco CurcioDepartment of Medicine, University of Udine, Udine, Italy.ORCID https://orcid.org/0000-0002-9070-4807

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundSince the beginning of the pandemic, clinicians and researchers have been searching for alternative tests to improve the screening and diagnosis of the SARS-CoV-2 infection. Currently, the gold standard for virus identification is the nasopharyngeal (NP) swab. Saliva samples, however, offer clear, practical, and logistical advantages but due to a lack of collection, transport, and storage solutions, high-throughput saliva-based laboratory tests are difficult to scale up as a screening or diagnostic tool. With this study, we aimed to validate an intralaboratory molecular detection method for SARS-CoV-2 on saliva samples collected in a new storage saline solution, comparing the results to NP swabs to determine the difference in sensitivity between the two tests.

methodsIn this study, 156 patients (cases) and 1005 asymptomatic subjects (controls) were enrolled and tested simultaneously for the detection of the SARS-CoV-2 viral genome by RT-PCR on both NP swab and saliva samples. Saliva samples were collected in a preservative and inhibiting saline solution (Biofarma Srl). Internal method validation was performed to standardize the entire workflow for saliva samples.

resultsThe identification of SARS-CoV-2 conducted on saliva samples showed a clinical sensitivity of 95.1% and specificity of 97.8% compared to NP swabs. The positive predictive value (PPV) was 81% while the negative predictive value (NPV) was 99.5%. Test concordance was 97.6% (Cohen's Kappa = 0.86; 95% CI 0.81-0.91). The LoD of the test was 5 viral copies for both samples.

conclusionsRT-PCR assays conducted on a stored saliva sample achieved similar performance to those on NP swabs, and this may provide a very effective tool for population screening and diagnosis. Collection of saliva in a stabilizing solution makes the test more convenient and widely available; furthermore, the denaturing properties of the solution reduce the infective risks belonging to sample manipulation.

Indexed as

AdultAgedCase-Control StudiesCOVID-19 Nucleic Acid TestingHumansMiddle AgedNasopharynxPredictive Value of TestsRNA, ViralSalivaSARS-CoV-2Specimen HandlingRNA, Viral

Identifiers

PMID35035611
PMCPMC8759915

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.