Evidence map›Paper›PMID 35034092›Full record

ArticleEuropean journal of human genetics : EJHG2022

Bi-allelic SMO variants in hypothalamic hamartoma: a recessive cause of Pallister-Hall syndrome.

Timothy E Green, Mareike Schimmel, Susanna Schubert, Johannes R Lemke, Mark F Bennett, Michael S Hildebrand, Samuel F Berkovic

Open access · bronzeAbstract read
In one paragraph

Article in European journal of human genetics : EJHG, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.7field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 9 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. Clinical and molecular heterogeneity of syndromic hypothalamic hamartoma.American journal of medical genetics. Part A · 2023
    Article
  5. Article
  6. Good genotype-phenotype relationships in rare disease are hard to find.European journal of human genetics : EJHG · 2022
    Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 2 countries.

Timothy E GreenEpilepsy Research Centre, Department of Medicine, The University of Melbourne, Austin Health, Heidelberg, Vic, Australia.
Mareike SchimmelChildren's Hospital, University Hospital Augsburg, Augsburg, Germany.
Susanna SchubertInstitute of Human Genetics, University of Leipzig Medical Centre, Leipzig, Germany.
Johannes R LemkeInstitute of Human Genetics, University of Leipzig Medical Centre, Leipzig, Germany.ORCID 0000-0002-4435-6610
Mark F BennettEpilepsy Research Centre, Department of Medicine, The University of Melbourne, Austin Health, Heidelberg, Vic, Australia.
Michael S Hildebrand *Epilepsy Research Centre, Department of Medicine, The University of Melbourne, Austin Health, Heidelberg, Vic, Australia. michael.hildebrand@unimelb.edu.au.ORCID 0000-0003-2739-0515
Samuel F Berkovic *Epilepsy Research Centre, Department of Medicine, The University of Melbourne, Austin Health, Heidelberg, Vic, Australia. s.berkovic@unimelb.edu.au.ORCID 0000-0003-4580-841X
The University of Melbourne · AULeipzig University · DERoyal Children's Hospital · AUUniversity Hospital Augsburg · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Pallister-Hall syndrome, typically caused by germline or de novo variants within the GLI3 gene, has key features of hypothalamic hamartoma and polydactyly. Recently, a few similar cases have been described with bi-allelic SMO variants. We describe two siblings born to non-consanguineous unaffected parents presenting with hypothalamic hamartoma, post-axial polydactyly, microcephaly amongst other developmental anomalies. Previous clinical diagnostic exome analysis had excluded a pathogenic variant in GLI3. We performed exome sequencing re-analysis and identified bi-allelic SMO variants including a missense and synonymous variant in both affected siblings. We functionally characterised this synonymous variant showing it induces exon 8 skipping within the SMO transcript. Our results confirm bi-allelic SMO variants as an uncommon cause of Pallister-Hall syndrome and describe a novel exon-skipping mechanism, expanding the molecular architecture of this new clinico-molecular disorder.

Indexed as

HamartomaHypothalamic DiseasesPallister-Hall SyndromePolydactylyHumansSmoothened ReceptorSmoothened ReceptorSMO protein, human

Identifiers

PMID35034092
PMCPMC8904774
OpenAlexW4205299784

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.