Evidence map›Paper›PMID 35032866›Full record

ArticleVirology2022

Induction of thymic atrophy and loss of thymic output by type-I interferons during chronic viral infection.

Thomas Démoulins, Marie-Laurence Baron, Dominique Gauchat, Nadia Kettaf, Steven James Reed, Tania Charpentier, Ulrich Kalinke, Alain Lamarre, Rafi Ahmed, Rafick-Pierre Sékaly and 2 more

Open access · greenAbstract read
In one paragraph

Article in Virology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.4field-weighted citation impact, top 41% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. The role of interferon in the thymus.Current opinion in immunology · 2023
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 6 institutions in 4 countries.

Thomas DémoulinsInstitute of Virology and Immunology, Bern, Switzerland; Department of Infectious Diseases and Pathobiology, Vetsuisse Faculty, University of Bern, Bern, Switzerland.
Marie-Laurence BaronNexdot, 102 Avenue Gaston Roussel, Romainville, 93230, France.
Dominique GauchatCentre Hospitalier de l'Université de Montréal (CHUM), 1000, rue Saint-Denis, Montréal, Québec, H2X 0C1, Canada.
Nadia KettafLaboratoire d'immunologie, Centre de Recherche du Centre Hospitalier de l'Université de Montréal, Saint-Luc, Montréal, QC, H2X 1P1, Canada.
Steven James ReedBen Towne Center for Childhood Cancer Research, Seattle Children's Research Institute, Seattle, WA, 98101, USA.
Tania CharpentierCentre INRS-Institut Armand-Frappier, 531, Boulevard des Prairies, Laval, Québec, H7V 1B7, Canada.
Ulrich KalinkeInstitute for Experimental Infection Research, TWINCORE, Centre for Experimental and Clinical Infection Research, A Joint Venture Between the Helmholtz Centre for Infection Research and the Hannover Medical School, Hannover, Germany.
Alain LamarreCentre INRS-Institut Armand-Frappier, 531, Boulevard des Prairies, Laval, Québec, H7V 1B7, Canada.
Rafi AhmedDepartment of Microbiology & Immunology, School of Medicine, Emory University, 1510 Clifton Road, Atlanta, GA, USA.
Rafick-Pierre SékalyDepartment of Pathology, Emory University Winship Cancer Center, Atlanta, GA, USA.
Surojit SarkarBen Towne Center for Childhood Cancer Research, Seattle Children's Research Institute, Seattle, WA, 98101, USA; Department of Pathology, University of Washington School of Medicine, Seattle, WA, 98195, USA; Department of Pediatrics, Division of Hematology and Oncology, University of Washington, Seattle, WA, 98195, USA. Electronic address: sarkarkalia@gmail.com.
Vandana KaliaBen Towne Center for Childhood Cancer Research, Seattle Children's Research Institute, Seattle, WA, 98101, USA; Department of Pediatrics, Division of Hematology and Oncology, University of Washington, Seattle, WA, 98195, USA. Electronic address: vkalia@uw.edu.
Seattle Children's Hospital · USCentre Hospitalier de l’Université de Montréal · CAEmory University · USInstitut National de la Recherche Scientifique · CAMedizinische Hochschule Hannover · DEUniversity of Bern · CH

Funding

Mechanisms of T Cell Quiescence and ExhaustionR01AI132819 · NIAID · SEATTLE CHILDREN'S HOSPITAL · PI Surojit Sarkar · 2019 to 2026
$5.0M
Differential IL-2 Expression by Effector CD8 T cells and Fate DeterminationR21AI154363 · NIAID · SEATTLE CHILDREN'S HOSPITAL · PI KALIA, VANDANA · 2020 to 2021
$512k
Mechanisms of Immune Memory Regulation by PD-1R03AI103748 · NIAID · PENNSYLVANIA STATE UNIVERSITY, THE · PI SARKAR, SUROJIT · 2013 to 2014
$149k
NIAID NIH HHS R01 AI132819NIAID NIH HHS R03 AI103748NIAID NIH HHS R21 AI154363
6 · The paper itself

Abstract

Type-I interferon (IFN-I) signals exert a critical role in disease progression during viral infections. However, the immunomodulatory mechanisms by which IFN-I dictates disease outcomes remain to be fully defined. Here we report that IFN-I signals mediate thymic atrophy in viral infections, with more severe and prolonged loss of thymic output and unique kinetics and subtypes of IFN-α/β expression in chronic infection compared to acute infection. Loss of thymic output was linked to inhibition of early stages of thymopoiesis (DN1-DN2 transition, and DN3 proliferation) and pronounced apoptosis during the late DP stage. Notably, infection-associated thymic defects were largely abrogated upon ablation of IFNαβR and partially mitigated in the absence of CD8 T cells, thus implicating direct as well as indirect effects of IFN-I on thymocytes. These findings provide mechanistic underpinnings for immunotherapeutic strategies targeting IFN-1 signals to manipulate disease outcomes during chronic infections and cancers.

Indexed as

AnimalsAtrophyCD8-Positive T-LymphocytesChronic DiseaseFemaleGene Expression RegulationHumansImmunologic MemoryInterferon-alphaInterferon-betaLymph NodesLymphocyte DepletionLymphocytic ChoriomeningitisLymphocytic choriomeningitis virusMiceMice, Inbred C57BLInterferon-alphaInterferon-betaReceptor, Interferon alpha-betaAcuteCD8 T cellsChronicThymic atrophyThymopoiesisType-I interferonsViral infection

Identifiers

PMID35032866
PMCPMC12924682
OpenAlexW4200490868

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.