Evidence map›Paper›PMID 35032412›Full record

ArticleFASEB journal : official publication of the Federation of American Societies for Experimental Biology2022

Decoding the role of macrophages in periodontitis and type 2 diabetes using single-cell RNA-sequencing.

Panagiota Agrafioti, Joshua Morin-Baxter, Kranthi K K Tanagala, Sunil Dubey, Peter Sims, Evanthia Lalla, Fatemeh Momen-Heravi

Open access · greenAbstract read
In one paragraph

Article in FASEB journal : official publication of the Federation of American Societies for Experimental Biology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed
6.8field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed, 48 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Panagiota AgrafiotiDivision of Periodontics, Section of Oral, Diagnostic and Rehabilitation Sciences, College of Dental Medicine, Columbia University, New York, New York, USA.
Joshua Morin-BaxterCancer Biology and Immunology Laboratory, Columbia University Irving Medical Center, New York, New York, USA.
Kranthi K K TanagalaDivision of Periodontics, Section of Oral, Diagnostic and Rehabilitation Sciences, College of Dental Medicine, Columbia University, New York, New York, USA.
Sunil DubeyDivision of Periodontics, Section of Oral, Diagnostic and Rehabilitation Sciences, College of Dental Medicine, Columbia University, New York, New York, USA.
Peter SimsDepartment of Systems Biology, Columbia University Irving Medical Center, New York, New York, USA.
Evanthia LallaDivision of Periodontics, Section of Oral, Diagnostic and Rehabilitation Sciences, College of Dental Medicine, Columbia University, New York, New York, USA.
Fatemeh Momen-HeraviDivision of Periodontics, Section of Oral, Diagnostic and Rehabilitation Sciences, College of Dental Medicine, Columbia University, New York, New York, USA.ORCID 0000-0003-4534-1450
Columbia University Irving Medical Center · USColumbia University · US

Funding

Clinical and Translational Science AwardUL1TR001873 · NCATS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI REILLY, MUREDACH P · 2016 to 2025
$99.0M
Institutional Career Development CoreKL2TR001874 · NCATS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI GENKINGER, JEANINE M., SHIMBO, DAICHI · 2016 to 2025
$13.6M
Monocyte and Macrophage Signaling in the Pathogenesis of Periodontitis in DiabetesR03DE029546 · NIDCR · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI MOMEN HERAVI, FATEMEH · 2020 to 2021
$324k
NCATS NIH HHS KL2 TR001874NCATS NIH HHS UL1 TR001873NIDCR NIH HHS L30 DE029070NIDCR NIH HHS R03 DE029546
6 · The paper itself

Abstract

Macrophages are resident myeloid cells in the gingival tissue which control homeostasis and play a pivotal role in orchestrating the immune response in periodontitis. Cell heterogeneity and functional phenotypes of macrophage subpopulations in periodontitis remain elusive. Here, we isolated gingival tissue from periodontitis-affected and healthy sites of patients with and without type 2 diabetes mellitus (T2DM). We then used single-cell RNA-sequencing (scRNA-seq) to define the heterogeneity of tissue-resident macrophages in gingival tissue in health vs. periodontitis. scRNA-seq demonstrated an unforeseen gene expression heterogeneity among macrophages in periodontitis and showed transcriptional and signaling heterogeneity of identified subsets in an independent cohort of patients with periodontitis and T2DM. Our bioinformatic inferences indicated divergent expression profiles in macrophages driven by transcriptional regulators CIITA, RELA, RFX5, and RUNX2. Macrophages in periodontitis expressed both pro-inflammatory and anti-inflammatory markers and their polarization was not mutually exclusive. The majority of macrophages in periodontitis expressed the monocyte lineage marker CD14, indicating their bone marrow lineage. We also found high expression and activation of RELA, a subunit of the NF-κB transcription factor complex, in gingival macrophages of periodontitis patients with T2DM. Our data suggested that heterogeneity and hyperinflammatory activation of macrophages may be relevant to the pathogenesis and outcomes of periodontitis, and may be further augmented in patients with T2DM.

Indexed as

AgedBiomarkersBone MarrowCell LineageDiabetes Mellitus, Type 2FemaleGingivaHumansInflammationLipopolysaccharide ReceptorsMacrophagesMaleMiddle AgedMonocytesMyeloid CellsPeriodontitisBiomarkersLipopolysaccharide ReceptorsRNATranscription Factorsmacrophagesperiodontitissingle-cell RNA-sequencingtype 2 diabetes

Identifiers

PMID35032412
PMCPMC8881186
OpenAlexW4205886653

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.