Evidence map›Paper›PMID 35031648›Full record

ArticleScientific reports2022

Mining for novel cyclomaltodextrin glucanotransferases unravels the carbohydrate metabolism pathway via cyclodextrins in Thermoanaerobacterales.

Sara Centeno-Leija, Laura Espinosa-Barrera, Beatriz Velazquez-Cruz, Yair Cárdenas-Conejo, Raúl Virgen-Ortíz, Georgina Valencia-Cruz, Roberto A Saenz, Yerli Marín-Tovar, Saúl Gómez-Manzo, Beatriz Hernández-Ochoa and 5 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
2.0field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 16 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 5 institutions in 1 country.

Sara Centeno-LeijaConsejo Nacional de Ciencia y Tecnología, Laboratorio de Biología Sintética, Estructural y Molecular, Laboratorio de Agrobiotecnología, Tecnoparque CLQ, Universidad de Colima, Carretera Los Limones-Loma de Juárez, 28627, Colima, Colima, Mexico. scenteno0@ucol.mx.
Laura Espinosa-BarreraLaboratorio de Biología Sintética, Estructural y Molecular, Laboratorio de Agrobiotecnología, Tecnoparque CLQ, Universidad de Colima, Carretera Los Limones-Loma de Juárez, 28627, Colima, Colima, Mexico.
Beatriz Velazquez-CruzLaboratorio de Biología Sintética, Estructural y Molecular, Laboratorio de Agrobiotecnología, Tecnoparque CLQ, Universidad de Colima, Carretera Los Limones-Loma de Juárez, 28627, Colima, Colima, Mexico.
Yair Cárdenas-ConejoConsejo Nacional de Ciencia y Tecnología, Laboratorio de Biología Sintética, Estructural y Molecular, Laboratorio de Agrobiotecnología, Tecnoparque CLQ, Universidad de Colima, Carretera Los Limones-Loma de Juárez, 28627, Colima, Colima, Mexico.
Raúl Virgen-OrtízLaboratorio de Biología Sintética, Estructural y Molecular, Laboratorio de Agrobiotecnología, Tecnoparque CLQ, Universidad de Colima, Carretera Los Limones-Loma de Juárez, 28627, Colima, Colima, Mexico.
Georgina Valencia-CruzCentro Universitario de Investigaciones Biomédicas, Universidad de Colima, Avenida 25 de julio 965, Colonia Villa de San Sebastián, 28045, Colima, Colima, Mexico.
Roberto A SaenzFacultad de Ciencias, Universidad de Colima, Bernal Díaz del Castillo 340, 28045, Colima, Colima, Mexico.
Yerli Marín-TovarLaboratorio de Bioquímica Estructural, Departamento de Medicina Molecular y Bioprocesos, Instituto de Biotecnología, Universidad Nacional Autónoma de México, Avenida Universidad 2001, Colonia Chamilpa, 62210, Cuernavaca, Mexico.
Saúl Gómez-ManzoLaboratorio de Bioquímica Genética, Instituto Nacional de Pediatría, Secretaría de Salud, 04530, Mexico City, Mexico.
Beatriz Hernández-OchoaLaboratorio de Inmunoquímica y Biología Celular, Hospital Infantil de México Federico Gómez, Secretaría de Salud, 06720, Mexico City, Mexico.
Luz María Rocha-RamirezUnidad de Investigación en Enfermedades Infecciosas, Hospital Infantil de México Federico Gómez, Dr. Márquez No. 162, Colonia Doctores, 06720, Delegación Cuauhtémoc, Mexico.
Rocío Zataraín-PalaciosEscuela de Medicina General, Universidad José Martí, Bosques del Decán 351, 28089, Colima, Colima, México.
Juan A Osuna-CastroFacultad de Ciencias Biológicas y Agropecuarias, Universidad de Colima, Autopista Colima-Manzanillo, 28100, Tecomán, Colima, Mexico.
Agustín López-MunguíaInstituto de Biotecnología, Universidad Nacional Autónoma de México, Avenida Universidad 2001, Colonia Chamilpa, 62210, Cuernavaca, Morelos, Mexico.
Hugo Serrano-PosadaConsejo Nacional de Ciencia y Tecnología, Laboratorio de Biología Sintética, Estructural y Molecular, Laboratorio de Agrobiotecnología, Tecnoparque CLQ, Universidad de Colima, Carretera Los Limones-Loma de Juárez, 28627, Colima, Colima, Mexico. hserrano0@ucol.mx.
Universidad de Colima · MXUniversidad Nacional Autónoma de México · MXHospital Infantil de México Federico Gómez · MXInstituto Nacional de Pediatria · MXSecretaria de Salud · MX

Funding

Consejo Nacional de Ciencia y Tecnología 218862Consejo Nacional de Ciencia y Tecnología 593790Consejo Nacional de Ciencia y Tecnología 753081Consejo Nacional de Ciencia y Tecnología CB-2016-01-285001Consejo Nacional de Ciencia y Tecnología CB-2018-A1-S-18011Consejo Nacional de Ciencia y Tecnología CF-2019-33-549477Consejo Nacional de Ciencia y Tecnología INFR-2017-01-280608Consejo Nacional de Ciencia y Tecnología INFR-2021-17-316456National Institute of Pediatrics, Mexico City, Mexico E022 programNational Institute of Pediatrics, Mexico City, Mexico INP 031/2019
6 · The paper itself

Abstract

Carbohydrate metabolism via cyclodextrins (CM-CD) is an uncommon starch-converting pathway that thoroughly depends on extracellular cyclomaltodextrin glucanotransferases (CGTases) to transform the surrounding starch substrate to α-(1,4)-linked oligosaccharides and cyclodextrins (CDs). The CM-CD pathway has emerged as a convenient microbial adaptation to thrive under extreme temperatures, as CDs are functional amphipathic toroids with higher heat-resistant values than linear dextrins. Nevertheless, although the CM-CD pathway has been described in a few mesophilic bacteria and archaea, it remains obscure in extremely thermophilic prokaryotes (T

Indexed as

Carbohydrate MetabolismCyclodextrinsGenome, BacterialGlucosyltransferasesMultigene FamilyThermoanaerobacteriumCyclodextrinscyclomaltodextrin glucanotransferaseGlucosyltransferases

Identifiers

PMID35031648
PMCPMC8760340
OpenAlexW4205480789

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.