ArticleBMC plant biology2022
Heat shock transcription factor (Hsf) gene family in common bean (Phaseolus vulgaris): genome-wide identification, phylogeny, evolutionary expansion and expression analyses at the sprout stage under abiotic stress.
Article in BMC plant biology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
31 citing papers in PubMed, 63 citations in OpenAlex.
- Genome-wide identification of Hsf gene family in citrus and functional analysis of CsHsfA1a in heat stress response.Plant cell reports · 2026Article
- Article
- Integrating Morphological, Pathogenic, and Molecular Approaches to CharacterizeCurrent issues in molecular biology · 2025Article
- Genome-Wide Identification and Expression Analysis of Heat Shock Transcription Factors inPlants (Basel, Switzerland) · 2025Article
- Genome-wide identification of MGT gene family in soybean (Glycine max) and their expression analyses under magnesium stress conditions.BMC plant biology · 2025Article
- Genome-Wide Characterization of the Heat Shock Transcription Factor Gene Family inInternational journal of molecular sciences · 2024Article
- Genome-Wide Identification and Expression Analysis of theCurrent issues in molecular biology · 2024Article
- Genome-wide identification, phylogeny and expression analysis of Hsf gene family in Verbena bonariensis under low-temperature stress.BMC genomics · 2024Article
- Genome-Wide Analysis of theInternational journal of molecular sciences · 2024Article
- Characterization of the Heat Shock Transcription Factor Family inPlants (Basel, Switzerland) · 2024Article
- General Analysis of Heat Shock Factors in theInternational journal of molecular sciences · 2024Article
- Comprehensive analysis of the aldehyde dehydrogenase gene family inFrontiers in plant science · 2024Article
- StHsfB5 Promotes Heat Resistance by Directly Regulating the Expression ofInternational journal of molecular sciences · 2023Article
- HSF and Hsp Gene Families in sunflower: a comprehensive genome-wide determination survey and expression patterns under abiotic stress conditions.Protoplasma · 2023Article
- Genome-wide identification and comprehensive analysis heat shock transcription factor (Hsf) members in asparagus (Asparagus officinalis) at the seeding stage under abiotic stresses.Scientific reports · 2023Article
- Genome-wide identification, phylogenetic and expression pattern analysis of HSF family genes in the Rye (Secale cereale L.).BMC plant biology · 2023Article
- Isoenzymes of the Flavonoid and Phenylpropanoid Pathways Show Organ-Specific Regulation during Apple Fruit Development.International journal of molecular sciences · 2023Article
- Characterization of the Heat Shock Transcription Factor Family inInternational journal of molecular sciences · 2023Article
- Full-Length Transcriptome Sequencing Reveals the Molecular Mechanism ofAntioxidants (Basel, Switzerland) · 2023Article
- Nanofungicides with Selenium and Silicon Can Boost the Growth and Yield of Common Bean (Microorganisms · 2023Article
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
12 authors at 2 institutions in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
backgroundCommon bean (Phaseolus vulgaris) is an essential crop with high economic value. The growth of this plant is sensitive to environmental stress. Heat shock factor (Hsf) is a family of antiretroviral transcription factors that regulate plant defense system against biotic and abiotic stress. To date, few studies have identified and bio-analyzed Hsfs in common bean.
resultsIn this study, 30 Hsf transcription factors (PvHsf1-30) were identified from the PFAM database. The PvHsf1-30 belonged to 14 subfamilies with similar motifs, gene structure and cis-acting elements. The Hsf members in Arabidopsis, rice (Oryza sativa), maize (Zea mays) and common bean were classified into 14 subfamilies. Collinearity analysis showed that PvHsfs played a role in the regulation of responses to abiotic stress. The expression of PvHsfs varied across different tissues. Moreover, quantitative real-time PCR (qRT-PCR) revealed that most PvHsfs were differentially expressed under cold, heat, salt and heavy metal stress, indicating that PvHsfs might play different functions depending on the type of abiotic stress.
conclusionsIn this study, we identified 30 Hsf transcription factors and determined their location, motifs, gene structure, cis-elements, collinearity and expression patterns. It was found that PvHsfs regulates responses to abiotic stress in common bean. Thus, this study provides a basis for further analysis of the function of PvHsfs in the regulation of abiotic stress in common bean.
Indexed as
Identifiers
What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.