Evidence map›Paper›PMID 35030990›Full record

ArticleJournal of neurodevelopmental disorders2022

Down-regulation of the brain-specific cell-adhesion molecule contactin-3 in tuberous sclerosis complex during the early postnatal period.

Anatoly Korotkov, Mark J Luinenburg, Alessia Romagnolo, Till S Zimmer, Jackelien van Scheppingen, Anika Bongaarts, Diede W M Broekaart, Jasper J Anink, Caroline Mijnsbergen, Floor E Jansen and 18 more

Open access · goldAbstract read
In one paragraph

Article in Journal of neurodevelopmental disorders, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.9field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 9 citations in OpenAlex.

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  7. GABAScientific reports · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

28 authors at 12 institutions in 7 countries.

Anatoly Korotkov *Department of (Neuro) Pathology, Amsterdam UMC, University of Amsterdam, Amsterdam Neuroscience, Amsterdam, the Netherlands.ORCID 0000-0002-8313-6282
Mark J Luinenburg *Department of (Neuro) Pathology, Amsterdam UMC, University of Amsterdam, Amsterdam Neuroscience, Amsterdam, the Netherlands.
Alessia RomagnoloDepartment of (Neuro) Pathology, Amsterdam UMC, University of Amsterdam, Amsterdam Neuroscience, Amsterdam, the Netherlands.
Till S ZimmerDepartment of (Neuro) Pathology, Amsterdam UMC, University of Amsterdam, Amsterdam Neuroscience, Amsterdam, the Netherlands.
Jackelien van ScheppingenDepartment of (Neuro) Pathology, Amsterdam UMC, University of Amsterdam, Amsterdam Neuroscience, Amsterdam, the Netherlands.
Anika BongaartsDepartment of (Neuro) Pathology, Amsterdam UMC, University of Amsterdam, Amsterdam Neuroscience, Amsterdam, the Netherlands.
Diede W M BroekaartDepartment of (Neuro) Pathology, Amsterdam UMC, University of Amsterdam, Amsterdam Neuroscience, Amsterdam, the Netherlands.
Jasper J AninkDepartment of (Neuro) Pathology, Amsterdam UMC, University of Amsterdam, Amsterdam Neuroscience, Amsterdam, the Netherlands.
Caroline MijnsbergenDepartment of (Neuro) Pathology, Amsterdam UMC, University of Amsterdam, Amsterdam Neuroscience, Amsterdam, the Netherlands.
Floor E JansenDepartment of Paediatric Neurology, University Medical Center, Brain Center, Utrecht, the Netherlands.
Wim van HeckeDepartment of Pathology, University Medical Center Utrecht, Utrecht, the Netherlands.
Wim G SplietDepartment of Pathology, University Medical Center Utrecht, Utrecht, the Netherlands.
Peter C van RijenRudolf Magnus Institute for Neuroscience, University Medical Center, Brain Center, Utrecht, the Netherlands.
Martha FeuchtDepartment of Pediatrics, Medical University Vienna, Vienna, Austria.
Johannes A HainfellnerInstitute of Neurology, Medical University Vienna, Vienna, Austria.
Pavel KrsekDepartment of Pediatric Neurology, 2nd Faculty of Medicine and Motol University Hospital, Prague, Czech Republic.
Josef ZamecnikDepartment of Pathology and Molecular Medicine, 2nd Faculty of Medicine and Motol University Hospital, Prague, Czech Republic.
Peter B CrinoDepartment of Neurology, University of Maryland School of Medicine, Baltimore, MD, USA.
Katarzyna KotulskaDepartment of Neurology and Epileptology, The Children's Memorial Health Institute, Warsaw, Poland.
Lieven LagaeDepartment of Development and Regeneration-Section Pediatric Neurology, University Hospitals KU Leuven, Leuven, Belgium.
Anna C JansenPediatric Neurology Unit, Universitair Ziekenhuis Brussel, Vrije Universiteit Brussel, Brussels, Belgium.
David J KwiatkowskiHarvard Medical School, Brigham and Women's Hospital, Boston, MA, USA.
Sergiusz JozwiakDepartment of Child Neurology, Medical University of Warsaw, Warsaw, Poland.
Paolo CuratoloDepartment of Clinical and Experimental Epilepsy, University College London, London, UK.
Angelika MühlebnerDepartment of (Neuro) Pathology, Amsterdam UMC, University of Amsterdam, Amsterdam Neuroscience, Amsterdam, the Netherlands.
Erwin A van Vliet *Department of (Neuro) Pathology, Amsterdam UMC, University of Amsterdam, Amsterdam Neuroscience, Amsterdam, the Netherlands.
James D Mills *Department of (Neuro) Pathology, Amsterdam UMC, University of Amsterdam, Amsterdam Neuroscience, Amsterdam, the Netherlands.
Eleonora Aronica *Department of (Neuro) Pathology, Amsterdam UMC, University of Amsterdam, Amsterdam Neuroscience, Amsterdam, the Netherlands. e.aronica@amsterdamumc.nl.
Amsterdam Neuroscience · NLUniversity Medical Center Utrecht · NLNetherlands Institute for Neuroscience · NLUniversity Hospital in Motol · CZBrigham and Women's Hospital · USChildren's Memorial Health Institute · PLEpilepsy Research UK · GBKU Leuven · BEMedical University of Vienna · ATMedical University of Warsaw · PLUniversity of Maryland, Baltimore · USVrije Universiteit Brussel · BE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe genetic disorder tuberous sclerosis complex (TSC) is frequently accompanied by the development of neuropsychiatric disorders, including autism spectrum disorder and intellectual disability, with varying degrees of impairment. These co-morbidities in TSC have been linked to the structural brain abnormalities, such as cortical tubers, and recurrent epileptic seizures (in 70-80% cases). Previous transcriptomic analysis of cortical tubers revealed dysregulation of genes involved in cell adhesion in the brain, which may be associated with the neurodevelopmental deficits in TSC. In this study we aimed to investigate the expression of one of these genes - cell-adhesion molecule contactin-3.

methodsReverse transcription quantitative polymerase chain reaction for the contactin-3 gene (CNTN3) was performed in resected cortical tubers from TSC patients with drug-resistant epilepsy (n = 35, age range: 1-48 years) and compared to autopsy-derived cortical control tissue (n = 27, age range: 0-44 years), as well as by western blot analysis of contactin-3 (n = 7 vs n = 7, age range: 0-3 years for both TSC and controls) and immunohistochemistry (n = 5 TSC vs n = 4 controls). The expression of contactin-3 was further analyzed in fetal and postnatal control tissue by western blotting and in-situ hybridization, as well as in the SH-SY5Y neuroblastoma cell line differentiation model in vitro.

resultsCNTN3 gene expression was lower in cortical tubers from patients across a wide range of ages (fold change = - 0.5, p < 0.001) as compared to controls. Contactin-3 protein expression was lower in the age range of 0-3 years old (fold change = - 3.8, p < 0.001) as compared to the age-matched controls. In control brain tissue, contactin-3 gene and protein expression could be detected during fetal development, peaked around birth and during infancy and declined in the adult brain. CNTN3 expression was induced in the differentiated SH-SY5Y neuroblastoma cells in vitro (fold change = 6.2, p < 0.01).

conclusionsOur data show a lower expression of contactin-3 in cortical tubers of TSC patients during early postnatal period as compared to controls, which may affect normal brain development and might contribute to neuropsychiatric co-morbidities observed in patients with TSC.

Indexed as

ContactinsTuberous SclerosisAdolescentAdultAutism Spectrum DisorderBrainChildChild, PreschoolDown-RegulationHumansInfantInfant, NewbornMiddle AgedYoung AdultCNTN3 protein, humanContactinsCell adhesionCerebral cortex developmentEpilepsymTORopathiesNeurodevelopmental disorders

Identifiers

PMID35030990
PMCPMC8903535
OpenAlexW4205701765

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.