Evidence map›Paper›PMID 35028612›Full record

ArticleCell reports. Medicine2021

Multiomic analysis identifies CPT1A as a potential therapeutic target in platinum-refractory, high-grade serous ovarian cancer.

Dongqing Huang, Shrabanti Chowdhury, Hong Wang, Sara R Savage, Richard G Ivey, Jacob J Kennedy, Jeffrey R Whiteaker, Chenwei Lin, Xiaonan Hou, Ann L Oberg and 20 more

Open access · goldAbstract read
In one paragraph

Article in Cell reports. Medicine, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 45 papers.

0numbers the graph read from it
0cells of the map it votes in
45citing papers in PubMed
5.2field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

45 citing papers in PubMed, 71 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

30 authors at 10 institutions in 1 country.

Dongqing HuangClinical Research Division, Fred Hutchinson Cancer Research Center, Seattle, WA 98109, USA.
Shrabanti ChowdhuryDepartment of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA.
Hong WangClinical Research Division, Fred Hutchinson Cancer Research Center, Seattle, WA 98109, USA.
Sara R SavageLester and Sue Smith Breast Center, Baylor College of Medicine, Houston, TX 77030, USA.
Richard G IveyClinical Research Division, Fred Hutchinson Cancer Research Center, Seattle, WA 98109, USA.
Jacob J KennedyClinical Research Division, Fred Hutchinson Cancer Research Center, Seattle, WA 98109, USA.
Jeffrey R WhiteakerClinical Research Division, Fred Hutchinson Cancer Research Center, Seattle, WA 98109, USA.
Chenwei LinClinical Research Division, Fred Hutchinson Cancer Research Center, Seattle, WA 98109, USA.
Xiaonan HouDepartment of Oncology, Mayo Clinic, Rochester, MN 55905, USA.
Ann L ObergDepartment of Quantitative Health Sciences, Division of Computational Biology, Mayo Clinic, Rochester, MN 55905, USA.
Melissa C LarsonDepartment of Quantitative Health Sciences, Division of Clinical Trials and Biostatistics, Mayo Clinic, Rochester, MN 55905, USA.
Najmeh EskandariDivision of Hematology and Oncology, Department of Medicine, University of Illinois, Chicago, IL 60612, USA.
Davide A DelisiDivision of Hematology and Oncology, Department of Medicine, University of Illinois, Chicago, IL 60612, USA.
Saverio GentileDivision of Hematology and Oncology, Department of Medicine, University of Illinois, Chicago, IL 60612, USA.
Catherine J HuntoonDepartment of Oncology, Mayo Clinic, Rochester, MN 55905, USA.
Uliana J VoytovichClinical Research Division, Fred Hutchinson Cancer Research Center, Seattle, WA 98109, USA.
Zahra J ShireClinical Research Division, Fred Hutchinson Cancer Research Center, Seattle, WA 98109, USA.
Qing YuDepartment of Cell Biology, Harvard Medical School, Boston, MA 02115, USA.
Steven P GygiDepartment of Cell Biology, Harvard Medical School, Boston, MA 02115, USA.
Andrew N HoofnagleDepartment of Lab Medicine, University of Washington, Seattle, WA 98195, USA.
Zachary T HerbertMolecular Biology Core Facilities, Dana-Farber Cancer Institute, Boston, MA 02215, USA.
Travis D LorentzenClinical Research Division, Fred Hutchinson Cancer Research Center, Seattle, WA 98109, USA.
Anna CalinawanDepartment of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA.
Larry M KarnitzDepartment of Oncology, Mayo Clinic, Rochester, MN 55905, USA.
S John WerohaDepartment of Oncology, Mayo Clinic, Rochester, MN 55905, USA.
Scott H KaufmannDepartment of Oncology, Mayo Clinic, Rochester, MN 55905, USA.
Bing ZhangLester and Sue Smith Breast Center, Baylor College of Medicine, Houston, TX 77030, USA.
Pei WangDepartment of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA.
Michael J BirrerUniversity of Arkansas for Medical Sciences, Little Rock, AR 72205, USA.
Amanda G PaulovichClinical Research Division, Fred Hutchinson Cancer Research Center, Seattle, WA 98109, USA.
Fred Hutch Cancer Center · USMayo Clinic in Arizona · USIcahn School of Medicine at Mount Sinai · USUniversity of Illinois Chicago · USBaylor College of Medicine · USHarvard University · USMayo Clinic in Florida · USDana-Farber Cancer Institute · USUniversity of Arkansas for Medical Sciences · USUniversity of Washington · US

Funding

Women's Cancer ProgramP30CA015083 · NCI · MAYO CLINIC ROCHESTER · PI AKHILESH PANDEY · 1985 to 2026
$151.3M
Use of microfluidic tumor cultures to enable clinical trials of therapies for ovarian cancerP50CA136393 · NCI · MAYO CLINIC ROCHESTER · PI ELLEN L. GOODE · 2009 to 2026
$37.0M
Proteogenomic Studies aimed at understanding ovarian tumor responses to agents targeting the DNA damage response and translating this knowledge into clinical benefitU01CA214114 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI BIRRER, MICHAEL, PAULOVICH, AMANDA G · 2017 to 2021
$8.4M
iPGDAC, An Integrative Proteogenomic Data Analysis Center for CPTACU24CA210954 · NCI · BAYLOR COLLEGE OF MEDICINE · PI ZHANG, BING · 2016 to 2020
$4.9M
Systems Biology based Proteogenomic Translator for Cancer Marker Discovery towards Precision MedicineU24CA210993 · NCI · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI SCHADT, ERIC E, WANG, PEI · 2016 to 2020
$4.6M
A proteomics research specialist in developing targeted mass spectrometry methods for quantifying proteins important in cancerR50CA211499 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI Jeff Whiteaker · 2016 to 2026
$2.8M
High-Performance Compute Cluster for Comprehensive Cancer and Infectious Diseases ResearchS10OD028685 · OD · FRED HUTCHINSON CANCER RESEARCH CENTER · PI BRADLEY, PHILIP · 2020 to 2020
$2.0M
NCI NIH HHS P30 CA015083NCI NIH HHS P50 CA136393NCI NIH HHS R50 CA211499NCI NIH HHS U01 CA214114NCI NIH HHS U24 CA210954NCI NIH HHS U24 CA210993NIH HHS S10 OD028685
6 · The paper itself

Abstract

Resistance to platinum compounds is a major determinant of patient survival in high-grade serous ovarian cancer (HGSOC). To understand mechanisms of platinum resistance and identify potential therapeutic targets in resistant HGSOC, we generated a data resource composed of dynamic (±carboplatin) protein, post-translational modification, and RNA sequencing (RNA-seq) profiles from intra-patient cell line pairs derived from 3 HGSOC patients before and after acquiring platinum resistance. These profiles reveal extensive responses to carboplatin that differ between sensitive and resistant cells. Higher fatty acid oxidation (FAO) pathway expression is associated with platinum resistance, and both pharmacologic inhibition and CRISPR knockout of

Indexed as

GenomicsMolecular Targeted TherapyAcetyl-CoA CarboxylaseAnimalsApoptosisCarboplatinCarnitine O-PalmitoyltransferaseCell Line, TumorCell ProliferationCystadenocarcinoma, SerousDNA DamageDrug Resistance, NeoplasmFatty AcidsFemaleGene Expression Regulation, NeoplasticHumansACACB protein, humanAcetyl-CoA CarboxylaseCarboplatinCarnitine O-PalmitoyltransferaseCPT1A protein, humanFatty AcidsPhosphoproteinsReactive Oxygen SpeciescarboplatinCPT1Afatty acid oxidationovarian canceroxidative phosphorylationproteogenomicproteomicreactive oxygen speciesresistance

Identifiers

PMID35028612
PMCPMC8714940
OpenAlexW4200591918

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.