Evidence map›Paper›PMID 35027873›Full record

ArticleJournal of biomolecular techniques : JBT2021

Real-time optical analysis of a colorimetric LAMP assay for SARS-CoV-2 in saliva with a handheld instrument improves accuracy compared with endpoint assessment.

Lena M Diaz, Brandon E Johnson, Daniel M Jenkins

Open access · diamondAbstract read
In one paragraph

Article in Journal of biomolecular techniques : JBT, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
1.1field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 20 citations in OpenAlex.

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  16. Initial Evaluation of a Mobile SARS-CoV-2 RT-LAMP Testing Strategy.Journal of biomolecular techniques : JBT · 2021
    Article
  17. Review
  18. Initial evaluation of a mobile SARS-CoV-2 RT-LAMP testing strategy.medRxiv : the preprint server for health sciences · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Lena M DiazDepartment of Molecular Biosciences and Bioengineering, College of Tropical Agriculture and Human Resources, University of Hawaiï i at Mãnoa, Honolulu, HI, USA.
Brandon E JohnsonCenter for Biomedical Research, The Queen's Medical Center, Honolulu, HI, USA.
Daniel M JenkinsDepartment of Molecular Biosciences and Bioengineering, College of Tropical Agriculture and Human Resources, University of Hawaiï i at Mãnoa, Honolulu, HI, USA.
University of Hawaiʻi at Mānoa · USQueen's Medical Center · US

Funding

Modulation of pain mechanisms by cannabis-derived phytochemicals.R01AT011162 · NCCIH · QUEEN'S MEDICAL CENTER · PI MACKIE, KENNETH, PENNER, REINHOLD · 2021 to 2025
$3.2M
NCCIH NIH HHS R01 AT011162
6 · The paper itself

Abstract

Controlling the course of the Coronavirus Disease 2019 (COVID-19) pandemic will require widespread deployment of consistent and accurate diagnostic testing of the novel Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2). Ideally, tests should detect a minimum viral load, be minimally invasive, and provide a rapid and simple readout. Current Food and Drug Administration (FDA)-approved RT-qPCR-based standard diagnostic approaches require invasive nasopharyngeal swabs and involve laboratory-based analyses that can delay results. Recently, a loop-mediated isothermal nucleic acid amplification (LAMP) test that utilizes colorimetric readout received FDA approval. This approach utilizes a pH indicator dye to detect drop in pH from nucleotide hydrolysis during nucleic acid amplification. This method has only been approved for use with RNA extracted from clinical specimens collected

Indexed as

COVID-19SARS-CoV-2ColorimetryHumansMolecular Diagnostic TechniquesNucleic Acid Amplification TechniquesRNA, ViralSalivaSensitivity and SpecificityRNA, ViralCOVID-19diagnosticsnear patientRNA detectionRT-LAMP

Identifiers

PMID35027873
PMCPMC8730521
OpenAlexW4205167153

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.