Evidence map›Paper›PMID 35027292›Full record

ArticleGenetics in medicine : official journal of the American College of Medical Genetics2022

Genetic Determinants of Sudden Unexpected Death in Pediatrics.

Hyun Yong Koh, Alireza Haghighi, Christine Keywan, Sanda Alexandrescu, Erin Plews-Ogan, Elisabeth A Haas, Catherine A Brownstein, Sara O Vargas, Robin L Haynes, Gerard T Berry and 3 more

Open access · hybridAbstract read
In one paragraph

Article in Genetics in medicine : official journal of the American College of Medical Genetics, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
4.5field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 43 citations in OpenAlex.

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  14. Brainstem depolarization-induced lethal apnea associated with gain-of-functionProceedings of the National Academy of Sciences of the United States of America · 2024
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  20. Implications of Genomic Newborn Screening for Infant Mortality.International journal of neonatal screening · 2023
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

13 authors at 3 institutions in 1 country.

Hyun Yong KohRobert's Program for Sudden Unexpected Death in Pediatrics, Boston Children's Hospital, Boston, MA; F.M. Kirby Neurobiology Center, Boston Children's Hospital, Boston, MA; Epilepsy Genetics Program, Department of Neurology, Boston Children's Hospital and Harvard Medical School, Boston, MA; Division of Genetics and Genomics, Department of Pediatrics and Manton Center for Orphan Diseases Research, Boston Children's Hospital, MA.
Alireza HaghighiDepartment of Genetics, Harvard Medical School, Boston, MA; Department of Medicine, Brigham and Women's Hospital and Harvard Medical School, Boston, MA; Broad Institute of MIT and Harvard, Cambridge, MA.
Christine KeywanRobert's Program for Sudden Unexpected Death in Pediatrics, Boston Children's Hospital, Boston, MA.
Sanda AlexandrescuRobert's Program for Sudden Unexpected Death in Pediatrics, Boston Children's Hospital, Boston, MA; Departments of Pathology, Boston Children's Hospital and Harvard Medical School, Boston, MA.
Erin Plews-OganRobert's Program for Sudden Unexpected Death in Pediatrics, Boston Children's Hospital, Boston, MA; Harvard Medical School, Boston, MA.
Elisabeth A HaasDepartment of Research, Rady Children's Hospital-San Diego, San Diego, CA.
Catherine A BrownsteinRobert's Program for Sudden Unexpected Death in Pediatrics, Boston Children's Hospital, Boston, MA; Division of Genetics and Genomics, Department of Pediatrics and Manton Center for Orphan Diseases Research, Boston Children's Hospital, MA; Department of Pediatrics, Harvard Medical School, Boston, MA.
Sara O VargasRobert's Program for Sudden Unexpected Death in Pediatrics, Boston Children's Hospital, Boston, MA; Departments of Pathology, Boston Children's Hospital and Harvard Medical School, Boston, MA.
Robin L HaynesDepartments of Pathology, Boston Children's Hospital and Harvard Medical School, Boston, MA.
Gerard T BerryRobert's Program for Sudden Unexpected Death in Pediatrics, Boston Children's Hospital, Boston, MA; Division of Genetics and Genomics, Department of Pediatrics and Manton Center for Orphan Diseases Research, Boston Children's Hospital, MA; Department of Pediatrics, Harvard Medical School, Boston, MA.
Ingrid A HolmRobert's Program for Sudden Unexpected Death in Pediatrics, Boston Children's Hospital, Boston, MA; Division of Genetics and Genomics, Department of Pediatrics and Manton Center for Orphan Diseases Research, Boston Children's Hospital, MA; Broad Institute of MIT and Harvard, Cambridge, MA; Department of Pediatrics, Harvard Medical School, Boston, MA.
Annapurna H PoduriRobert's Program for Sudden Unexpected Death in Pediatrics, Boston Children's Hospital, Boston, MA; F.M. Kirby Neurobiology Center, Boston Children's Hospital, Boston, MA; Epilepsy Genetics Program, Department of Neurology, Boston Children's Hospital and Harvard Medical School, Boston, MA; Broad Institute of MIT and Harvard, Cambridge, MA; Department of Neurology, Harvard Medical School, Boston, MA.
Richard D GoldsteinRobert's Program for Sudden Unexpected Death in Pediatrics, Boston Children's Hospital, Boston, MA; Broad Institute of MIT and Harvard, Cambridge, MA; Department of Pediatrics, Harvard Medical School, Boston, MA; Division of General Pediatrics, Department of Pediatrics, Boston Children's Hospital, Boston, MA. Electronic address: richard.goldstein@childrens.harvard.edu.
Boston Children's Hospital · USBroad Institute · USRady Children's Hospital-San Diego · US

Funding

Genetic Analysis and Manipulation Core (GAEC)P50HD105351 · NICHD · BOSTON CHILDREN'S HOSPITAL · PI Hisashi Umemori · 2021 to 2026
$9.4M
The Hippocampus and Brainstem in the Sudden Infant Death SyndromeR01HD090064 · NICHD · BOSTON CHILDREN'S HOSPITAL · PI HAYNES, ROBIN LYNN · 2017 to 2021
$3.2M
Discovery of Novel Genetic Variants Underlying Unexplained Hypertrophic Cardiomyopathy by Whole Genome Sequencing, RNA-seq and iPSC modelingK08HL150284 · NHLBI · BRIGHAM AND WOMEN'S HOSPITAL · PI HAGHIGHI, ALIREZA · 2020 to 2024
$832k
Genetics of Sudden Unexpected Death in PediatricsR21HD096355 · NICHD · BOSTON CHILDREN'S HOSPITAL · PI GOLDSTEIN, RICHARD DANIEL, HOLM, INGRID ADELE · 2018 to 2019
$487k
NHLBI NIH HHS K08 HL150284NICHD NIH HHS P50 HD105351NICHD NIH HHS R01 HD090064NICHD NIH HHS R21 HD096355
6 · The paper itself

Abstract

purposeThis study aimed to evaluate genetic contributions to sudden unexpected death in pediatrics (SUDP).

methodsWe phenotyped and performed exome sequencing for 352 SUDP cases. We analyzed variants in 294 "SUDP genes" with mechanisms plausibly related to sudden death. In a subset of 73 cases with parental data (trios), we performed exome-wide analyses and conducted cohort-wide burden analyses.

resultsIn total, we identified likely contributory variants in 37 of 352 probands (11%). Analysis of SUDP genes identified pathogenic/likely pathogenic variants in 12 of 352 cases (SCN1A, DEPDC5 [2], GABRG2, SCN5A [2], TTN [2], MYBPC3, PLN, TNNI3, and PDHA1) and variants of unknown significance-favor-pathogenic in 17 of 352 cases. Exome-wide analyses of the 73 cases with family data additionally identified 4 de novo pathogenic/likely pathogenic variants (SCN1A [2], ANKRD1, and BRPF1) and 4 de novo variants of unknown significance-favor-pathogenic. Comparing cases with controls, we demonstrated an excess burden of rare damaging SUDP gene variants (odds ratio, 2.94; 95% confidence interval, 2.37-4.21) and of exome-wide de novo variants in the subset of 73 with trio data (odds ratio, 3.13; 95% confidence interval, 1.91-5.16).

conclusionWe provide strong evidence for a role of genetic factors in SUDP, involving both candidate genes and novel genes for SUDP and expanding phenotypes of disease genes not previously associated with sudden death.

Indexed as

Death, SuddenPediatricsAdaptor Proteins, Signal TransducingBromodomain Containing ProteinsChildChild, PreschoolDNA-Binding ProteinsExomeExome SequencingHumansInfantInfant, NewbornPhenotypeAdaptor Proteins, Signal TransducingBromodomain Containing ProteinsBRPF1 protein, humanDNA-Binding ProteinsIntrinsic vulnerabilitySudden infant death syndromeSudden unexpected death in pediatricsSudden unexpected infant deathSudden unexplained death in childhood

Identifiers

PMID35027292
PMCPMC9164313
OpenAlexW4226263763

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.