Evidence map›Paper›PMID 35027002›Full record

ArticleBMC medical research methodology2022

Spatiotemporal variations in exposure: Chagas disease in Colombia as a case study.

Julia Ledien, Zulma M Cucunubá, Gabriel Parra-Henao, Eliana Rodríguez-Monguí, Andrew P Dobson, María-Gloria Basáñez, Pierre Nouvellet

Abstract read
In one paragraph

Article in BMC medical research methodology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Accelerating Progress Towards the 2030 Neglected Tropical Diseases Targets: How Can Quantitative Modeling Support Programmatic Decisions?Clinical infectious diseases : an official publication of the Infectious Diseases Society of America · 2024
    Article
  2. From serological surveys to disease burden: a modelling pipeline for Chagas disease.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2023
    Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Julia LedienSchool of Life Sciences, University of Sussex, Brighton, UK. j.ledien@sussex.ac.uk.
Zulma M CucunubáLondon Centre for Neglected Tropical Disease Research & MRC Centre for Global Infectious Disease Analysis, Imperial College London, London, UK.
Gabriel Parra-HenaoCentro de Investigación en Salud para el Trópico, Universidad Cooperativa de Colombia, Santa Marta, Colombia.
Eliana Rodríguez-MonguíNeglected, Tropical and Vector Borne Diseases Program, Pan American Health Organization (PAHO), Bogotá, Colombia.
Andrew P DobsonEcology & Evolutionary Biology, Princeton University, Princeton, USA.
María-Gloria BasáñezLondon Centre for Neglected Tropical Disease Research & MRC Centre for Global Infectious Disease Analysis, Imperial College London, London, UK.
Pierre NouvelletSchool of Life Sciences, University of Sussex, Brighton, UK.

Funding

Medical Research Council MR/R015600/1World Health Organization 001
6 · The paper itself

Abstract

Age-stratified serosurvey data are often used to understand spatiotemporal trends in disease incidence and exposure through estimating the Force-of-Infection (FoI). Typically, median or mean FoI estimates are used as the response variable in predictive models, often overlooking the uncertainty in estimated FoI values when fitting models and evaluating their predictive ability. To assess how this uncertainty impact predictions, we compared three approaches with three levels of uncertainty integration. We propose a performance indicator to assess how predictions reflect initial uncertainty.In Colombia, 76 serosurveys (1980-2014) conducted at municipality level provided age-stratified Chagas disease prevalence data. The yearly FoI was estimated at the serosurvey level using a time-varying catalytic model. Environmental, demographic and entomological predictors were used to fit and predict the FoI at municipality level from 1980 to 2010 across Colombia.A stratified bootstrap method was used to fit the models without temporal autocorrelation at the serosurvey level. The predictive ability of each model was evaluated to select the best-fit models within urban, rural and (Amerindian) indigenous settings. Model averaging, with the 10 best-fit models identified, was used to generate predictions.Our analysis shows a risk of overconfidence in model predictions when median estimates of FoI alone are used to fit and evaluate models, failing to account for uncertainty in FoI estimates. Our proposed methodology fully propagates uncertainty in the estimated FoI onto the generated predictions, providing realistic assessments of both central tendency and current uncertainty surrounding exposure to Chagas disease.

Indexed as

Chagas DiseaseCitiesColombiaHumansPrevalenceUncertaintyChagas diseaseForce of infectionInfectious diseaseModel averagingModelling

Identifiers

PMID35027002
PMCPMC8759231

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.