Evidence map›Paper›PMID 35025883›Full record

ArticlePLoS computational biology2022

Dominating lengthscales of zebrafish collective behaviour.

Yushi Yang, Francesco Turci, Erika Kague, Chrissy L Hammond, John Russo, C Patrick Royall

Abstract read
In one paragraph

Article in PLoS computational biology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Yushi YangBristol Centre for Functional Nanomaterials, University of Bristol, Bristol, United Kingdom.ORCID 0000-0002-6401-8088
Francesco TurciH.H. Wills Physics Laboratory, University of Bristol, Bristol, United Kingdom.ORCID 0000-0002-0687-0715
Erika KagueDepartment of Physiology, Pharmacology, and Neuroscience, Medical Sciences, University of Bristol, Bristol, United Kingdom.ORCID 0000-0002-0266-9424
Chrissy L HammondDepartment of Physiology, Pharmacology, and Neuroscience, Medical Sciences, University of Bristol, Bristol, United Kingdom.ORCID 0000-0002-4935-6724
John RussoDepartment of Physics, Sapienza Università di Roma, Rome, Italy.ORCID 0000-0002-6234-6344
C Patrick RoyallH.H. Wills Physics Laboratory, University of Bristol, Bristol, United Kingdom.

Funding

Versus Arthritis 21211Versus Arthritis 21937
6 · The paper itself

Abstract

Collective behaviour in living systems is observed across many scales, from bacteria to insects, to fish shoals. Zebrafish have emerged as a model system amenable to laboratory study. Here we report a three-dimensional study of the collective dynamics of fifty zebrafish. We observed the emergence of collective behaviour changing between ordered to randomised, upon adaptation to new environmental conditions. We quantify the spatial and temporal correlation functions of the fish and identify two length scales, the persistence length and the nearest neighbour distance, that capture the essence of the behavioural changes. The ratio of the two length scales correlates robustly with the polarisation of collective motion that we explain with a reductionist model of self-propelled particles with alignment interactions.

Indexed as

Models, BiologicalAnimalsBehavior, AnimalComputational BiologyImaging, Three-DimensionalSpatial BehaviorSwimmingZebrafish

Identifiers

PMID35025883
PMCPMC8797201

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.