Evidence map›Paper›PMID 35024770›Full record

ArticleThe Journal of cell biology2022

Detection and quantification of the vacuolar H+ATPase using the Legionella effector protein SidK.

Michelle E Maxson, Yazan M Abbas, Jing Ze Wu, Jonathan D Plumb, Sergio Grinstein, John L Rubinstein

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of cell biology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
3.0field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 37 citations in OpenAlex.

  1. Article
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  4. Molecular evolution and adaptations ofFrontiers in cellular and infection microbiology · 2026
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  7. Journal of bacteriology · 2024
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  8. Structure of yeast RAVE bound to a partial VProceedings of the National Academy of Sciences of the United States of America · 2024
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  11. Two-pore channels regulate endomembrane tension to enable remodeling and resolution of phagolysosomes.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  12. A model for collagen secretion by intercompartmental continuities.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  13. Article
  14. Vesicular glutamate transporters are HNature communications · 2023
    Article
  15. Eat or Be Eaten: Strategies Used byInfection and immunity · 2023
    Review
  16. Article
  17. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Michelle E MaxsonProgram in Cell Biology, The Hospital for Sick Children, Toronto, Canada.ORCID 0000-0002-1493-490X
Yazan M AbbasProgram in Molecular Medicine, The Hospital for Sick Children Research Institute, Toronto, Canada.ORCID 0000-0001-5625-1034
Jing Ze WuProgram in Cell Biology, The Hospital for Sick Children, Toronto, Canada.ORCID 0000-0001-6592-320X
Jonathan D PlumbProgram in Cell Biology, The Hospital for Sick Children, Toronto, Canada.ORCID 0000-0002-8985-2087
Sergio GrinsteinProgram in Cell Biology, The Hospital for Sick Children, Toronto, Canada.ORCID 0000-0002-0795-4160
John L RubinsteinProgram in Molecular Medicine, The Hospital for Sick Children Research Institute, Toronto, Canada.ORCID 0000-0003-0566-2209
Hospital for Sick Children · CAUniversity of Toronto · CA

Funding

CIHR FDN-143202CIHR PJT166152
6 · The paper itself

Abstract

Acidification of secretory and endocytic organelles is required for proper receptor recycling, membrane traffic, protein degradation, and solute transport. Proton-pumping vacuolar H+ ATPases (V-ATPases) are responsible for this luminal acidification, which increases progressively as secretory and endocytic vesicles mature. An increasing density of V-ATPase complexes is thought to account for the gradual decrease in pH, but available reagents have not been sufficiently sensitive or specific to test this hypothesis. We introduce a new probe to localize and quantify V-ATPases. The probe is derived from SidK, a Legionella pneumophila effector protein that binds to the V-ATPase A subunit. We generated plasmids encoding fluorescent chimeras of SidK1-278, and labeled recombinant SidK1-278 with Alexa Fluor 568 to visualize and quantify V-ATPases with high specificity in live and fixed cells, respectively. We show that V-ATPases are acquired progressively during phagosome maturation, that they distribute in discrete membrane subdomains, and that their density in lysosomes depends on their subcellular localization.

Indexed as

AnimalsBacterial ProteinsFluorescenceHeLa CellsHumansHydrogen-Ion ConcentrationLegionellaLysosomesMicePhagosomesRatsRAW 264.7 CellsSaccharomyces cerevisiaeVacuolar Proton-Translocating ATPasesBacterial ProteinsVacuolar Proton-Translocating ATPases

Identifiers

PMID35024770
PMCPMC8763849
OpenAlexW4226137780

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.