Evidence map›Paper›PMID 35024100›Full record

ArticleComputational and structural biotechnology journal2022

Flow cytometry-based study of model marine microalgal consortia revealed an ecological advantage of siderophore utilization by the dinoflagellate

Ronald Malych, Pavel Stopka, Jan Mach, Eva Kotabová, Ondřej Prášil, Robert Sutak

Open access · goldAbstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Computational and structural biotechnology journal, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.6field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 4 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Ronald MalychDepartment of Parasitology, Faculty of Science, Charles University, BIOCEV, Vestec, Czech.
Pavel StopkaDepartment of Zoology, Faculty of Science, Charles University, BIOCEV, Vestec, Czech.
Jan MachDepartment of Parasitology, Faculty of Science, Charles University, BIOCEV, Vestec, Czech.
Eva KotabováInstitute of Microbiology, Academy of Sciences, Centrum Algatech, Trebon, Czech.
Ondřej PrášilInstitute of Microbiology, Academy of Sciences, Centrum Algatech, Trebon, Czech.
Robert SutakDepartment of Parasitology, Faculty of Science, Charles University, BIOCEV, Vestec, Czech.
Charles University · CZInstitute of Microbiology · BY

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Investigations of phytoplankton responses to iron stress in seawater are complicated by the fact that iron concentrations do not necessarily reflect bioavailability. Most studies to date have been based on single species or field samples and are problematic to interpret. Here, we report results from an experimental cocultivation model system that enabled us to evaluate interspecific competition as a function of iron content and form, and to study the effect of nutritional conditions on the proteomic profiles of individual species. Our study revealed that the dinoflagellate

Indexed as

Amphidinium carteraeAtpE, ATP synthaseAUC, area under curveBCS, bathocuproinedisulfonic acid disodium saltCREG1, cellular repressor of E1A stimulated genes 1DFOB, desferrioxamine BEDTA, ethylenediaminetetraacetic acidENT, enterobactinFACS, fluorescence-activated cell sortingFBAI, fructose-bisphosphate aldolase IFBAII, fructose-bisphosphate aldolase IIFBP1, putative ferrichrome-binding proteinFlow cytometryFOB, ferrioxamine BIronISIP, iron starvation induced proteinLHCX, light-harvesting complex subunitsLL, long-term iron limitationLR, iron enrichmentMarine microalgaeNBD, nitrobenz-2-oxa-1,3-diazoleNPQ, nonphotochemical quenchingPAGE, polyacrylamide gel electrophoresisPetA, cytochrome b6/fProteomicsPsaC, photosystem I iron-sulfur centerPsaD, photosystem I reaction center subunit IIPsaE, photosystem I reaction center subunit IVPsaL, photosystem I reaction center subunit XIPsbC, photosystem II CP43 reaction center proteinPsbV, cytochrome c-550PSII, photosystem IIPSI, photosystem IRR, long-term iron sufficiencySiderophoresSOD1, superoxide dismutase [Cu-Zn](s)PLS-DA, (sparse) partial least squares discriminant analysis

Identifiers

PMID35024100
PMCPMC8718654
OpenAlexW4200558961

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.