Evidence map›Paper›PMID 35022430›Full record

ArticleNPJ genomic medicine2022

Chromosomal microarray analysis of 410 Han Chinese patients with autism spectrum disorder or unexplained intellectual disability and developmental delay.

Yi Liu, Yuqiang Lv, Mehdi Zarrei, Rui Dong, Xiaomeng Yang, Edward J Higginbotham, Yue Li, Dongmei Zhao, Fengling Song, Yali Yang and 4 more

Open access · goldAbstract read
In one paragraph

Article in NPJ genomic medicine, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed, 1 pooled it
4.3field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 1 synthesis or guideline pooled it, 24 citations in OpenAlex.

  1. Pooled it
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  7. Association ofMolecular syndromology · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 3 institutions in 2 countries.

Yi Liu *Pediatric Research Institute, Qilu Children's Hospital of Shandong University, Ji'nan, 250022, China.ORCID http://orcid.org/0000-0002-1298-492X
Yuqiang Lv *Pediatric Research Institute, Qilu Children's Hospital of Shandong University, Ji'nan, 250022, China.
Mehdi ZarreiThe Centre for Applied Genomics and Department of Genetics and Genome Biology, The Hospital for Sick Children, Toronto, ON, M5G 0A4, Canada.
Rui DongPediatric Research Institute, Qilu Children's Hospital of Shandong University, Ji'nan, 250022, China.
Xiaomeng YangPediatric Research Institute, Qilu Children's Hospital of Shandong University, Ji'nan, 250022, China.
Edward J HigginbothamThe Centre for Applied Genomics and Department of Genetics and Genome Biology, The Hospital for Sick Children, Toronto, ON, M5G 0A4, Canada.ORCID http://orcid.org/0000-0003-1881-9308
Yue LiPediatric Research Institute, Qilu Children's Hospital of Shandong University, Ji'nan, 250022, China.
Dongmei ZhaoPediatric Health Care Institute, Qilu Children's Hospital of Shandong University, Ji'nan, 250022, China.
Fengling SongPediatric Health Care Institute, Qilu Children's Hospital of Shandong University, Ji'nan, 250022, China.
Yali YangRehabilitation Center, Qilu Children's Hospital of Shandong University, Ji'nan, 250022, China.
Haiyan ZhangPediatric Research Institute, Qilu Children's Hospital of Shandong University, Ji'nan, 250022, China.
Ying WangPediatric Research Institute, Qilu Children's Hospital of Shandong University, Ji'nan, 250022, China.
Stephen W SchererThe Centre for Applied Genomics and Department of Genetics and Genome Biology, The Hospital for Sick Children, Toronto, ON, M5G 0A4, Canada. stephen.scherer@sickkids.ca.ORCID http://orcid.org/0000-0002-8326-1999
Zhongtao GaiPediatric Research Institute, Qilu Children's Hospital of Shandong University, Ji'nan, 250022, China. gaizhongtao@sina.com.
Qilu Hospital of Shandong University · CNHospital for Sick Children · CAUniversity of Toronto · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Copy number variants (CNVs) are recognized as a crucial genetic cause of neurodevelopmental disorders (NDDs). Chromosomal microarray analysis (CMA), the first-tier diagnostic test for individuals with NDDs, has been utilized to detect CNVs in clinical practice, but most reports are still from populations of European ancestry. To contribute more worldwide clinical genomics data, we investigated the genetic etiology of 410 Han Chinese patients with NDDs (151 with autism and 259 with unexplained intellectual disability (ID) and developmental delay (DD)) using CMA (Affymetrix) after G-banding karyotyping. Among all the NDD patients, 109 (26.6%) carried clinically relevant CNVs or uniparental disomies (UPDs), and 8 (2.0%) had aneuploidies (6 with trisomy 21 syndrome, 1 with 47,XXY, 1 with 47,XYY). In total, we found 129 clinically relevant CNVs and UPDs, including 32 CNVs in 30 ASD patients, and 92 CNVs and 5 UPDs in 79 ID/DD cases. When excluding the eight patients with aneuploidies, the diagnostic yield of pathogenic and likely pathogenic CNVs and UPDs was 20.9% for all NDDs (84/402), 3.3% in ASD (5/151), and 31.5% in ID/DD (79/251). When aneuploidies were included, the diagnostic yield increased to 22.4% for all NDDs (92/410), and 33.6% for ID/DD (87/259). We identified a de novo CNV in 14.9% (60/402) of subjects with NDDs. Interestingly, a higher diagnostic yield was observed in females (31.3%, 40/128) compared to males (16.1%, 44/274) for all NDDs (P = 4.8 × 10

Identifiers

PMID35022430
PMCPMC8755789
OpenAlexW4206207015

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.