Evidence map›Paper›PMID 35020836›Full record

ArticleBlood2022

Tcf1 is essential for initiation of oncogenic Notch1-driven chromatin topology in T-ALL.

Mateusz Antoszewski, Nadine Fournier, Gustavo A Ruiz Buendía, Joao Lourenco, Yuanlong Liu, Tara Sugrue, Christelle Dubey, Marianne Nkosi, Colin E J Pritchard, Ivo J Huijbers and 9 more

Abstract read
In one paragraph

Article in Blood, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Review
  5. Review
  6. Article
  7. Article
  8. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

19 authors.

Mateusz AntoszewskiEcole Polytechnique Fédérale de Lausanne (EPFL), School of Life Sciences, Swiss Institute for Experimental Cancer Research (ISREC), Lausanne, Switzerland.ORCID 0000-0002-7651-0547
Nadine FournierEcole Polytechnique Fédérale de Lausanne (EPFL), School of Life Sciences, Swiss Institute for Experimental Cancer Research (ISREC), Lausanne, Switzerland.ORCID 0000-0002-9347-7929
Gustavo A Ruiz BuendíaBioinformatics Core Facility, Swiss Institute of Bioinformatics (SIB), Lausanne, Switzerland.ORCID 0000-0002-4935-1480
Joao LourencoBioinformatics Core Facility, Swiss Institute of Bioinformatics (SIB), Lausanne, Switzerland.ORCID 0000-0001-6549-5209
Yuanlong LiuSwiss Cancer Center Leman (SCCL), Lausanne, Switzerland.ORCID 0000-0002-2483-024X
Tara SugrueEcole Polytechnique Fédérale de Lausanne (EPFL), School of Life Sciences, Swiss Institute for Experimental Cancer Research (ISREC), Lausanne, Switzerland.ORCID 0000-0001-6132-113X
Christelle DubeyEcole Polytechnique Fédérale de Lausanne (EPFL), School of Life Sciences, Swiss Institute for Experimental Cancer Research (ISREC), Lausanne, Switzerland.
Marianne NkosiEcole Polytechnique Fédérale de Lausanne (EPFL), School of Life Sciences, Swiss Institute for Experimental Cancer Research (ISREC), Lausanne, Switzerland.ORCID 0000-0003-2522-8370
Colin E J PritchardMouse Clinic for Cancer & Aging (MCCA)/Transgenic Core Facility, The Netherlands Cancer Institute, Amsterdam, The Netherlands.ORCID 0000-0001-7848-9377
Ivo J HuijbersMouse Clinic for Cancer & Aging (MCCA)/Transgenic Core Facility, The Netherlands Cancer Institute, Amsterdam, The Netherlands.ORCID 0000-0002-7954-8604
Gabriela C SegatTerry Fox Laboratory, BC Cancer Agency, Vancouver, BC, Canada.ORCID 0000-0002-9161-079X
Sandra Alonso-MorenoJosep Carreras Leukaemia Research Institute (IJC), Badalona, Barcelona, Spain.ORCID 0000-0001-6670-085X
Elisabeth SerracantaJosep Carreras Leukaemia Research Institute (IJC), Badalona, Barcelona, Spain.ORCID 0000-0002-0167-1215
Laura BelverJosep Carreras Leukaemia Research Institute (IJC), Badalona, Barcelona, Spain.ORCID 0000-0001-7493-7072
Adolfo A FerrandoInstitute for Cancer Genetics, Columbia University Medical Center, New York, NY.ORCID 0000-0002-6212-8574
Giovanni CirielloSwiss Cancer Center Leman (SCCL), Lausanne, Switzerland.ORCID 0000-0003-2021-8683
Andrew P WengTerry Fox Laboratory, BC Cancer Agency, Vancouver, BC, Canada.ORCID 0000-0001-7394-5425
Ute KochEcole Polytechnique Fédérale de Lausanne (EPFL), School of Life Sciences, Swiss Institute for Experimental Cancer Research (ISREC), Lausanne, Switzerland.ORCID 0000-0001-7914-7061
Freddy RadtkeEcole Polytechnique Fédérale de Lausanne (EPFL), School of Life Sciences, Swiss Institute for Experimental Cancer Research (ISREC), Lausanne, Switzerland.ORCID 0000-0003-4315-4045

Funding

Tumor Biology and Microenvironment ProgramP30CA013696 · NCI · COLUMBIA UNIV NEW YORK MORNINGSIDE · PI Anil K Rustgi · 1985 to 2026
$115.3M
Molecular pathways and targeted therapies in human leukemiaR35CA210065 · NCI · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI FERRANDO, ADOLFO A. · 2017 to 2021
$4.7M
NCI NIH HHS P30 CA013696NCI NIH HHS R35 CA210065
6 · The paper itself

Abstract

NOTCH1 is a well-established lineage specifier for T cells and among the most frequently mutated genes throughout all subclasses of T cell acute lymphoblastic leukemia (T-ALL). How oncogenic NOTCH1 signaling launches a leukemia-prone chromatin landscape during T-ALL initiation is unknown. Here we demonstrate an essential role for the high-mobility-group transcription factor Tcf1 in orchestrating chromatin accessibility and topology, allowing aberrant Notch1 signaling to convey its oncogenic function. Although essential, Tcf1 is not sufficient to initiate leukemia. The formation of a leukemia-prone epigenetic landscape at the distal Notch1-regulated Myc enhancer, which is fundamental to this disease, is Tcf1-dependent and occurs within the earliest progenitor stage even before cells adopt a T lymphocyte or leukemic fate. Moreover, we discovered a unique evolutionarily conserved Tcf1-regulated enhancer element in the distal Myc-enhancer, which is important for the transition of preleukemic cells to full-blown disease.

Indexed as

Precursor T-Cell Lymphoblastic Leukemia-LymphomaCarcinogenesisCell Line, TumorChromatinHumansOncogenesReceptor, Notch1ChromatinNOTCH1 protein, humanReceptor, Notch1

Identifiers

PMID35020836
PMCPMC9710489

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.