Evidence map›Paper›PMID 35019695›Full record

ArticleMicrobiology spectrum2022

Transcriptomic Analysis Reveals That Rho GTPases Regulate Trap Development and Lifestyle Transition of the Nematode-Trapping Fungus

Le Yang, Xuemei Li, Na Bai, Xuewei Yang, Ke-Qin Zhang, Jinkui Yang

Open access · goldAbstract read
In one paragraph

Article in Microbiology spectrum, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
9.5field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 45 citations in OpenAlex.

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  9. Multiple Roles of the Low-Affinity Calcium Uptake System inJournal of fungi (Basel, Switzerland) · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Le YangState Key Laboratory for Conservation and Utilization of Bio-Resources, Yunnan Universitygrid.440773.3, Kunming, People's Republic of China.
Xuemei LiState Key Laboratory for Conservation and Utilization of Bio-Resources, Yunnan Universitygrid.440773.3, Kunming, People's Republic of China.
Na BaiState Key Laboratory for Conservation and Utilization of Bio-Resources, Yunnan Universitygrid.440773.3, Kunming, People's Republic of China.
Xuewei YangState Key Laboratory for Conservation and Utilization of Bio-Resources, Yunnan Universitygrid.440773.3, Kunming, People's Republic of China.
Ke-Qin ZhangState Key Laboratory for Conservation and Utilization of Bio-Resources, Yunnan Universitygrid.440773.3, Kunming, People's Republic of China.
Jinkui YangState Key Laboratory for Conservation and Utilization of Bio-Resources, Yunnan Universitygrid.440773.3, Kunming, People's Republic of China.
Yunnan University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Nematode-trapping (NT) fungi can form unique infection structures (traps) to capture and kill free-living nematodes and, thus, can play a potential role in the biocontrol of nematodes. Arthrobotrys oligospora is a representative species of NT fungi. Here, we performed a time course transcriptome sequencing (RNA-seq) analysis of transcriptomes to understand the global gene expression levels of A. oligospora during trap formation and predation. We identified 5,752 unique differentially expressed genes, among which the

Indexed as

TranscriptomeAlternative SplicingAnimalsAscomycotaDNA DamageEcosystemGene Expression ProfilingGene Knockout TechniquesHyphaeLife StyleNematodarho GTP-Binding ProteinsSignal Transductionrho GTP-Binding Proteinsalternative splicingArthrobotrys oligosporalifestyle transitionRho GTPasestrap formation

Identifiers

PMID35019695
PMCPMC8754127
OpenAlexW4206752903

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.