Evidence map›Paper›PMID 35017516›Full record

ArticleNature communications2022

Neutron crystallography reveals mechanisms used by Pseudomonas aeruginosa for host-cell binding.

Lukas Gajdos, Matthew P Blakeley, Michael Haertlein, V Trevor Forsyth, Juliette M Devos, Anne Imberty

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
2.3field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 29 citations in OpenAlex.

  1. Article
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  11. Photoswitchable glycoligands targetingBeilstein journal of organic chemistry · 2024
    Article
  12. Review
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  14. Article
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  16. Relating protein crystal structure to ligand-binding thermodynamics.Acta crystallographica. Section F, Structural biology communications · 2022
    Article
  17. Discovery ofJournal of medicinal chemistry · 2022
    Article
  18. Review
  19. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 3 countries.

Lukas GajdosLife Sciences Group, Institut Laue-Langevin, 71 Avenue des Martyrs, 38000, Grenoble, France.ORCID http://orcid.org/0000-0002-9377-1677
Matthew P BlakeleyLarge Scale Structures Group, Institut Laue-Langevin, 71 Avenue des Martyrs, 38000, Grenoble, France.ORCID http://orcid.org/0000-0002-6412-4358
Michael HaertleinLife Sciences Group, Institut Laue-Langevin, 71 Avenue des Martyrs, 38000, Grenoble, France.
V Trevor ForsythLife Sciences Group, Institut Laue-Langevin, 71 Avenue des Martyrs, 38000, Grenoble, France.
Juliette M DevosLife Sciences Group, Institut Laue-Langevin, 71 Avenue des Martyrs, 38000, Grenoble, France. devosj@ill.fr.ORCID http://orcid.org/0000-0001-5989-6794
Anne ImbertyUniversité Grenoble Alpes, CNRS, CERMAV, 38000, Grenoble, France. anne.imberty@cermav.cnrs.fr.ORCID http://orcid.org/0000-0001-6825-9527
Institut Laue-Langevin · FRCentre National de la Recherche Scientifique · FRLund University · SE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The opportunistic pathogen Pseudomonas aeruginosa, a major cause of nosocomial infections, uses carbohydrate-binding proteins (lectins) as part of its binding to host cells. The fucose-binding lectin, LecB, displays a unique carbohydrate-binding site that incorporates two closely located calcium ions bridging between the ligand and protein, providing specificity and unusually high affinity. Here, we investigate the mechanisms involved in binding based on neutron crystallography studies of a fully deuterated LecB/fucose/calcium complex. The neutron structure, which includes the positions of all the hydrogen atoms, reveals that the high affinity of binding may be related to the occurrence of a low-barrier hydrogen bond induced by the proximity of the two calcium ions, the presence of coordination rings between the sugar, calcium and LecB, and the dynamic behaviour of bridging water molecules at room temperature. These key structural details may assist in the design of anti-adhesive compounds to combat multi-resistance bacterial infections.

Indexed as

Bacterial AdhesionBinding SitesCalciumCloning, MolecularCross InfectionCrystallography, X-RayDeuteriumEscherichia coliFucoseGene ExpressionGenetic VectorsHumansHydrogen BondingLectinsLigandsNeutronsCalciumDeuteriumFucoseLecB protein, Pseudomonas aeruginosaLectinsLigandsRecombinant ProteinsWater

Identifiers

PMID35017516
PMCPMC8752737
OpenAlexW4205342362

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.