Evidence map›Paper›PMID 35017494›Full record

ArticleNature communications2022

Towards a generic prototyping approach for therapeutically-relevant peptides and proteins in a cell-free translation system.

Yue Wu, Zhenling Cui, Yen-Hua Huang, Simon J de Veer, Andrey V Aralov, Zhong Guo, Shayli V Moradi, Alexandra O Hinton, Jennifer R Deuis, Shaodong Guo and 10 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 21 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Review
  5. One-pot cloning and protein expression platform for genetic engineering.bioRxiv : the preprint server for biology · 2025
    Article
  6. Article
  7. BeyondChemical reviews · 2025
    Review
  8. Review
  9. Prospects and challenges of recombinant spider venom enzymes: insights fromFrontiers in bioengineering and biotechnology · 2025
    Article
  10. Review
  11. Article
  12. ACS omega · 2023
    Article
  13. Review
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors at 5 institutions in 3 countries.

Yue Wu *Institute for Molecular Bioscience, The University of Queensland, Brisbane, QLD, 4072, Australia.
Zhenling Cui *ARC Centre of Excellence in Synthetic Biology, Sydney, VIC, Australia.
Yen-Hua HuangInstitute for Molecular Bioscience, The University of Queensland, Brisbane, QLD, 4072, Australia.ORCID http://orcid.org/0000-0001-6937-2660
Simon J de VeerInstitute for Molecular Bioscience, The University of Queensland, Brisbane, QLD, 4072, Australia.ORCID http://orcid.org/0000-0002-7041-9937
Andrey V AralovShemyakin-Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, Moscow, 117997, Russia.ORCID http://orcid.org/0000-0003-3268-2352
Zhong GuoARC Centre of Excellence in Synthetic Biology, Sydney, VIC, Australia.
Shayli V MoradiARC Centre of Excellence in Synthetic Biology, Sydney, VIC, Australia.
Alexandra O HintonInstitute for Molecular Bioscience, The University of Queensland, Brisbane, QLD, 4072, Australia.ORCID http://orcid.org/0000-0003-4721-341X
Jennifer R DeuisInstitute for Molecular Bioscience, The University of Queensland, Brisbane, QLD, 4072, Australia.
Shaodong GuoInstitute for Molecular Bioscience, The University of Queensland, Brisbane, QLD, 4072, Australia.ORCID http://orcid.org/0000-0002-7284-1058
Kai-En ChenInstitute for Molecular Bioscience, The University of Queensland, Brisbane, QLD, 4072, Australia.ORCID http://orcid.org/0000-0003-1106-1629
Brett M CollinsInstitute for Molecular Bioscience, The University of Queensland, Brisbane, QLD, 4072, Australia.ORCID http://orcid.org/0000-0002-6070-3774
Irina VetterInstitute for Molecular Bioscience, The University of Queensland, Brisbane, QLD, 4072, Australia.
Volker HerzigInstitute for Molecular Bioscience, The University of Queensland, Brisbane, QLD, 4072, Australia.ORCID http://orcid.org/0000-0003-2514-3983
Alun JonesInstitute for Molecular Bioscience, The University of Queensland, Brisbane, QLD, 4072, Australia.
Matthew A CooperInstitute for Molecular Bioscience, The University of Queensland, Brisbane, QLD, 4072, Australia.ORCID http://orcid.org/0000-0003-3147-3460
Glenn F KingInstitute for Molecular Bioscience, The University of Queensland, Brisbane, QLD, 4072, Australia.ORCID http://orcid.org/0000-0002-2308-2200
David J CraikInstitute for Molecular Bioscience, The University of Queensland, Brisbane, QLD, 4072, Australia.ORCID http://orcid.org/0000-0003-0007-6796
Kirill AlexandrovARC Centre of Excellence in Synthetic Biology, Sydney, VIC, Australia. kirill.alexandrov@qut.edu.au.ORCID http://orcid.org/0000-0002-0957-6511
Sergey MureevSchool of Biology and Environmental Science, Queensland University of Technology, Brisbane, QLD, 4001, Australia. ziraffa81@gmail.com.ORCID http://orcid.org/0000-0001-9999-3150
The University of Queensland · AUAustralian Research Council · AUQueensland Health · AUQueensland University of Technology · AUInstitute of Bioorganic Chemistry · RU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Advances in peptide and protein therapeutics increased the need for rapid and cost-effective polypeptide prototyping. While in vitro translation systems are well suited for fast and multiplexed polypeptide prototyping, they suffer from misfolding, aggregation and disulfide-bond scrambling of the translated products. Here we propose that efficient folding of in vitro produced disulfide-rich peptides and proteins can be achieved if performed in an aggregation-free and thermodynamically controlled folding environment. To this end, we modify an E. coli-based in vitro translation system to allow co-translational capture of translated products by affinity matrix. This process reduces protein aggregation and enables productive oxidative folding and recycling of misfolded states under thermodynamic control. In this study we show that the developed approach is likely to be generally applicable for prototyping of a wide variety of disulfide-constrained peptides, macrocyclic peptides with non-native bonds and antibody fragments in amounts sufficient for interaction analysis and biological activity assessment.

Indexed as

AnimalsAntibodiesCell-Free SystemCost-Benefit AnalysisData Interpretation, StatisticalDisulfidesDrosophila melanogasterDrugs, GenericEscherichia coliFemaleGene Expression RegulationHumansLeishmaniaPeptidesProtein AggregatesProtein DomainsAntibodiesDisulfidesDrugs, GenericPeptidesProtein AggregatesRNA, Ribosomal, 16S

Identifiers

PMID35017494
PMCPMC8752827
OpenAlexW4205869849

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.