Evidence map›Paper›PMID 35013818›Full record

ArticleArchives of virology2022

Molecular characterization of a novel fusagravirus in the phytopathogenic fungus Streptobotrys caulophylli.

Siryuyumunsi Daniel, Assane Hamidou Abdoulaye, Yue Deng, Mingde Wu, Jing Zhang, Guoqing Li

Abstract read
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In one paragraph

Article in Archives of virology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Discovery and Identification of Viruses Infecting Oomycetes.Methods in molecular biology (Clifton, N.J.) · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Siryuyumunsi DanielState Key Laboratory of Agricultural Microbiology, Huazhong Agricultural University, Wuhan, 430070, China.
Assane Hamidou AbdoulayeState Key Laboratory of Agricultural Microbiology, Huazhong Agricultural University, Wuhan, 430070, China.
Yue DengState Key Laboratory of Agricultural Microbiology, Huazhong Agricultural University, Wuhan, 430070, China.
Mingde WuState Key Laboratory of Agricultural Microbiology, Huazhong Agricultural University, Wuhan, 430070, China. mingde@mail.hzau.edu.cn.ORCID http://orcid.org/0000-0001-8014-5688
Jing ZhangState Key Laboratory of Agricultural Microbiology, Huazhong Agricultural University, Wuhan, 430070, China.
Guoqing LiState Key Laboratory of Agricultural Microbiology, Huazhong Agricultural University, Wuhan, 430070, China.

Funding

Major International Joint Research Programme 1861143043National Natural Science Foundation of China 320701863
6 · The paper itself

Abstract

Streptobotrys caulophylli is a pathogenic fungus that causes leaf and stem blight in many plants. We report a novel fusagravirus identified in S. caulophylli strain STB-2, provisionally named "Streptobotrys caulophylli fusagravirus 1" (ScFV1). The full-length genome of ScFV1 is 9270 nucleotides (nt) long and putatively possesses two large open reading frames (ORF1 and ORF2), which are separated by an intergenic region of 955 nt. A conserved domain search revealed that ORF2 (1051 aa) encodes a putative RNA-dependent RNA polymerase (RdRp), whereas ORF1 (1404 aa) encodes a protein of unknown function. Homology searches and phylogenetic analysis of the putative RdRp suggest that ScFV1 is a new member of the proposed family "Fusagraviridae". This is the first report of a mycovirus infecting the fungus S. caulophylli.

Indexed as

AscomycotaFungal VirusesRNA VirusesGenome, ViralOpen Reading FramesPhylogenyRNA, ViralRNA, Viral

Identifiers

PMID35013818

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.