Evidence map›Paper›PMID 35013592›Full record

ArticleNature microbiology2022

Dynamic diel proteome and daytime nitrogenase activity supports buoyancy in the cyanobacterium Trichodesmium.

Noelle A Held, John B Waterbury, Eric A Webb, Riss M Kellogg, Matthew R McIlvin, Michael Jakuba, Frederica W Valois, Dawn M Moran, Kevin M Sutherland, Mak A Saito

Open access · greenAbstract read
In one paragraph

Article in Nature microbiology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
8.0field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 43 citations in OpenAlex.

  1. Article
  2. Review
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  10. Recurrent association betweenISME communications · 2024
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  11. Article
  12. Review
  13. Review
  14. Article
  15. NmSystems · 2022
    Article
  16. Iron keeps Trichodesmium afloat.Nature reviews. Microbiology · 2022
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 2 countries.

Noelle A HeldMarine Chemistry and Geochemistry Department, Woods Hole Oceanographic Institution, Woods Hole, MA, USA.
John B WaterburyDepartment of Biology, Woods Hole Oceanographic Institution, Woods Hole, MA, USA.
Eric A WebbMarine and Environmental Biology, Department of Biological Sciences, University of Southern California, Los Angeles, CA, USA.
Riss M KelloggMarine Chemistry and Geochemistry Department, Woods Hole Oceanographic Institution, Woods Hole, MA, USA.
Matthew R McIlvinMarine Chemistry and Geochemistry Department, Woods Hole Oceanographic Institution, Woods Hole, MA, USA.
Michael JakubaDepartment of Applied Ocean Physics and Engineering, Woods Hole Oceanographic Institution, Woods Hole, MA, USA.ORCID http://orcid.org/0000-0002-0440-0074
Frederica W ValoisDepartment of Biology, Woods Hole Oceanographic Institution, Woods Hole, MA, USA.
Dawn M MoranMarine Chemistry and Geochemistry Department, Woods Hole Oceanographic Institution, Woods Hole, MA, USA.
Kevin M SutherlandMarine Chemistry and Geochemistry Department, Woods Hole Oceanographic Institution, Woods Hole, MA, USA.
Mak A SaitoMarine Chemistry and Geochemistry Department, Woods Hole Oceanographic Institution, Woods Hole, MA, USA. msaito@whoi.edu.ORCID http://orcid.org/0000-0001-6040-9295
Woods Hole Oceanographic Institution · USPlanetary Science Institute · USUniversity of Southern California · US

Funding

Response of the Bacterial Metalloproteome to Environmental ConditionsR01GM135709 · NIGMS · WOODS HOLE OCEANOGRAPHIC INSTITUTION · PI SAITO, MAKOTO · 2020 to 2023
$1.9M
NIGMS NIH HHS R01 GM135709
6 · The paper itself

Abstract

Cyanobacteria of the genus Trichodesmium provide about 80 Tg of fixed nitrogen to the surface ocean per year and contribute to marine biogeochemistry, including the sequestration of carbon dioxide. Trichodesmium fixes nitrogen in the daylight, despite the incompatibility of the nitrogenase enzyme with oxygen produced during photosynthesis. While the mechanisms protecting nitrogenase remain unclear, all proposed strategies require considerable resource investment. Here we identify a crucial benefit of daytime nitrogen fixation in Trichodesmium spp. that may counteract these costs. We analysed diel proteomes of cultured and field populations of Trichodesmium in comparison with the marine diazotroph Crocosphaera watsonii WH8501, which fixes nitrogen at night. Trichodesmium's proteome is extraordinarily dynamic and demonstrates simultaneous photosynthesis and nitrogen fixation, resulting in balanced particulate organic carbon and particulate organic nitrogen production. Unlike Crocosphaera, which produces large quantities of glycogen as an energy store for nitrogenase, proteomic evidence is consistent with the idea that Trichodesmium reduces the need to produce glycogen by supplying energy directly to nitrogenase via soluble ferredoxin charged by the photosynthesis protein PsaC. This minimizes ballast associated with glycogen, reducing cell density and decreasing sinking velocity, thus supporting Trichodesmium's niche as a buoyant, high-light-adapted colony forming cyanobacterium. To occupy its niche of simultaneous nitrogen fixation and photosynthesis, Trichodesmium appears to be a conspicuous consumer of iron, and has therefore developed unique iron-acquisition strategies, including the use of iron-rich dust. Particle capture by buoyant Trichodesmium colonies may increase the residence time and degradation of mineral iron in the euphotic zone. These findings describe how cellular biochemistry defines and reinforces the ecological and biogeochemical function of these keystone marine diazotrophs.

Indexed as

ProteomeBacterial ProteinsCarbon DioxideLightNitrogenNitrogenaseNitrogen FixationTime FactorsTrichodesmiumBacterial ProteinsCarbon DioxideNitrogenNitrogenaseProteome

Identifiers

PMID35013592
PMCPMC10288448
OpenAlexW4206226019

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.