Evidence map›Paper›PMID 35013199›Full record

ArticleNature communications2022

Cross-reactive memory T cells associate with protection against SARS-CoV-2 infection in COVID-19 contacts.

Rhia Kundu, Janakan Sam Narean, Lulu Wang, Joseph Fenn, Timesh Pillay, Nieves Derqui Fernandez, Emily Conibear, Aleksandra Koycheva, Megan Davies, Mica Tolosa-Wright and 13 more

Abstract read
In one paragraph

Article in Nature communications, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 218 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
218citing papers in PubMed, 2 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

218 citing papers in PubMed, 2 syntheses or guidelines pooled it.

  1. Pooled it
  2. Resolving SARS-CoV-2 CD4Cell reports. Medicine · 2022
    Pooled it
  3. Article
  4. Renaissance of antiviral CD8Nature reviews. Immunology · 2026
    Review
  5. Decoding the human CD4Cell reports. Medicine · 2026
    Article
  6. Article
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  17. Article
  18. Article
  19. Article
  20. Rethinking the evidence on COVID-19 in Africa.The Lancet. Infectious diseases · 2025
    Review

158 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

23 authors.

Rhia KunduNIHR HPRU in Respiratory Infections, Imperial College London, London, England. r.kundu@imperial.ac.uk.ORCID 0000-0003-3970-5860
Janakan Sam NareanNIHR HPRU in Respiratory Infections, Imperial College London, London, England.
Lulu WangNIHR HPRU in Respiratory Infections, Imperial College London, London, England.
Joseph FennNIHR HPRU in Respiratory Infections, Imperial College London, London, England.
Timesh PillayNIHR HPRU in Respiratory Infections, Imperial College London, London, England.
Nieves Derqui FernandezNIHR HPRU in Respiratory Infections, Imperial College London, London, England.ORCID 0000-0003-2407-3362
Emily ConibearNIHR HPRU in Respiratory Infections, Imperial College London, London, England.ORCID 0000-0002-3445-6992
Aleksandra KoychevaNIHR HPRU in Respiratory Infections, Imperial College London, London, England.
Megan DaviesNIHR HPRU in Respiratory Infections, Imperial College London, London, England.
Mica Tolosa-WrightNIHR HPRU in Respiratory Infections, Imperial College London, London, England.
Seran HakkiNIHR HPRU in Respiratory Infections, Imperial College London, London, England.
Robert VarroNIHR HPRU in Respiratory Infections, Imperial College London, London, England.ORCID 0000-0001-5526-225X
Eimear McDermottNIHR HPRU in Respiratory Infections, Imperial College London, London, England.
Sarah HammettNIHR HPRU in Respiratory Infections, Imperial College London, London, England.
Jessica CutajarNIHR HPRU in Respiratory Infections, Imperial College London, London, England.
Ryan S ThwaitesNational Heart and Lung Institute, Imperial College London, London, England.ORCID 0000-0003-3052-2793
Eleanor ParkerSection of Virology, Department of Infectious Disease, Imperial College London, London, England.ORCID 0000-0002-9898-8568
Carolina RosadasSection of Virology, Department of Infectious Disease, Imperial College London, London, England.
Myra McClureSection of Virology, Department of Infectious Disease, Imperial College London, London, England.
Richard TedderSection of Virology, Department of Infectious Disease, Imperial College London, London, England.
Graham P TaylorSection of Virology, Department of Infectious Disease, Imperial College London, London, England.ORCID 0000-0002-3773-2390
Jake DunningNational Infection Service, Public Health England, London, England.ORCID 0000-0002-4035-4562
Ajit LalvaniNIHR HPRU in Respiratory Infections, Imperial College London, London, England.

Funding

DH | National Institute for Health Research (NIHR) NIHR 200927RCUK | Medical Research Council (MRC) MR/R021643/1
6 · The paper itself

Abstract

Cross-reactive immune responses to SARS-CoV-2 have been observed in pre-pandemic cohorts and proposed to contribute to host protection. Here we assess 52 COVID-19 household contacts to capture immune responses at the earliest timepoints after SARS-CoV-2 exposure. Using a dual cytokine FLISpot assay on peripheral blood mononuclear cells, we enumerate the frequency of T cells specific for spike, nucleocapsid, membrane, envelope and ORF1 SARS-CoV-2 epitopes that cross-react with human endemic coronaviruses. We observe higher frequencies of cross-reactive (p = 0.0139), and nucleocapsid-specific (p = 0.0355) IL-2-secreting memory T cells in contacts who remained PCR-negative despite exposure (n = 26), when compared with those who convert to PCR-positive (n = 26); no significant difference in the frequency of responses to spike is observed, hinting at a limited protective function of spike-cross-reactive T cells. Our results are thus consistent with pre-existing non-spike cross-reactive memory T cells protecting SARS-CoV-2-naïve contacts from infection, thereby supporting the inclusion of non-spike antigens in second-generation vaccines.

Indexed as

AdultAntibodies, ViralContact TracingCoronavirusCOVID-19Cross ReactionsEpitopes, T-LymphocyteFemaleHumansMaleMemory T CellsMiddle AgedPandemicsSARS-CoV-2Spike Glycoprotein, CoronavirusViral ProteinsAntibodies, ViralEpitopes, T-LymphocyteSpike Glycoprotein, Coronavirusspike protein, SARS-CoV-2Viral Proteins

Identifiers

PMID35013199
PMCPMC8748880

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.