Evidence map›Paper›PMID 35012285›Full record

ArticleGenomics & informatics2021

Identification of rare coding variants associated with Kawasaki disease by whole exome sequencing.

Jae-Jung Kim, Young Mi Hong, Sin Weon Yun, Kyung-Yil Lee, Kyung Lim Yoon, Myung-Ki Han, Gi Beom Kim, Hong-Ryang Kil, Min Seob Song, Hyoung Doo Lee and 8 more

Abstract read
In one paragraph

Article in Genomics & informatics, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors.

Jae-Jung KimAsan Institute for Life Sciences, Asan Medical Center, University of Ulsan College of Medicine, Seoul 05505, Korea.
Young Mi HongDepartment of Pediatrics, Ewha Womans University Hospital, Seoul 07985, Korea.
Sin Weon YunDepartment of Pediatrics, Chung-Ang University Hospital, Seoul 06973, Korea.
Kyung-Yil LeeDepartment of Pediatrics, Daejeon St. Mary's Hospital, College of Medicine, The Catholic University of Korea, Daejeon 34943, Korea.
Kyung Lim YoonDepartment of Pediatrics, Kyung Hee University Hospital at Gangdong, Seoul 05278, Korea.
Myung-Ki HanDepartment of Pediatrics, Gangneung Asan Hospital, University of Ulsan College of Medicine, Gangneung 25440, Korea.
Gi Beom KimDepartment of Pediatrics, Seoul National University Children's Hospital, Seoul 03080, Korea.
Hong-Ryang KilDepartment of Pediatrics, Chungnam National University Hospital, Daejeon 35015, Korea.
Min Seob SongDepartment of Pediatrics, Inje University Paik Hospital, Busan 47392, Korea.
Hyoung Doo LeeDepartment of Pediatrics, Pusan National University Hospital, Busan 49241, Korea.
Kee Soo HaDepartment of Pediatrics, Korea University Guro Hospital, Seoul 08308, Korea.
Hyun Ok JunDepartment of Pediatrics and Adolescent Medicine, Myongji Hospital, Goyang 10475, Korea.
Byung-Ok ChoiDepartment of Neurology, Samsung Medical Center, Sungkyunkwan University School of Medicine, Seoul 04401, Korea.
Yeon-Mok OhDepartment of Pulmonary and Critical Care Medicine, Asan Medical Center, University of Ulsan College of Medicine, Seoul 05505, Korea.
Jeong Jin YuDepartment of Pediatrics, Asan Medical Center, University of Ulsan College of Medicine, Seoul 05505, Korea.
Gi Young JangDepartment of Pediatrics, Korea University Guro Hospital, Seoul 08308, Korea.
Jong-Keuk LeeAsan Institute for Life Sciences, Asan Medical Center, University of Ulsan College of Medicine, Seoul 05505, Korea.
Korean Kawasaki Disease Genetics Consortium

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Kawasaki disease (KD) is an acute pediatric vasculitis that affects genetically susceptible infants and children. To identify coding variants that influence susceptibility to KD, we conducted whole exome sequencing of 159 patients with KD and 902 controls, and performed a replication study in an independent 586 cases and 732 controls. We identified five rare coding variants in five genes (FCRLA, PTGER4, IL17F, CARD11, and SIGLEC10) associated with KD (odds ratio [OR], 1.18 to 4.41; p = 0.0027-0.031). We also performed association analysis in 26 KD patients with coronary artery aneurysms (CAAs; diameter > 5 mm) and 124 patients without CAAs (diameter < 3 mm), and identified another five rare coding variants in five genes (FGFR4, IL31RA, FNDC1, MMP8, and FOXN1), which may be associated with CAA (OR, 3.89 to 37.3; p = 0.0058-0.0261). These results provide insights into new candidate genes and genetic variants potentially involved in the development of KD and CAA.

Indexed as

association studycoronary artery aneurysmsKawasaki diseasewhole exome sequencing

Identifiers

PMID35012285
PMCPMC8752980

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.