ArticlePlants (Basel, Switzerland)2021
Genome-Wide Variation Analysis of Four Vegetable Soybean Cultivars Based on Re-Sequencing.
Article in Plants (Basel, Switzerland), 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.
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Who cites it
6 citing papers in PubMed.
- Article
- Molecular characterization of soybean accessions using ssr markers and unveiling the genetic diversity.Molecular biology reports · 2025Article
- Screening Germplasms and Detecting Quantitative Trait Loci for High Sucrose Content in Soybean.Plants (Basel, Switzerland) · 2024Article
- Genetic and Phenotypic Characterization of Soybean Landraces Collected from the Zhejiang Province in China.Plants (Basel, Switzerland) · 2024Article
- Transcriptome profiling uncovers differentially expressed genes linked to nutritional quality in vegetable soybean.PloS one · 2024Article
- Global Status of Vegetable Soybean.Plants (Basel, Switzerland) · 2023Review
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Authors and funding
6 authors.
Funding
Abstract
Vegetable soybean is a type of value-added specialty soybean, served as a fresh vegetable or snack in China. Due to the difference from other types, it is important to understand the genetic structure and diversity of vegetable soybean for further utilization in breeding programs. The four vegetable cultivars, Taiwan-75, Zhexiandou No. 8, Zhexian No. 9 and Zhexian No. 10 are popular soybean varieties planted in Zhejiang province, and have large pods and intermediate maturity. The clustering showed a close relationship of these four cultivars in simple sequence repeat analysis. To reveal the genome variation of vegetable soybean, these four improved lines were analyzed by whole-genome re-sequencing. The average sequencing depth was 7X and the coverage ratio of each cultivar was at least more than 94%. Compared with the reference genome, a large number of single-nucleotide polymorphisms, insertion/deletions and structure variations were identified with different chromosome distributions. The average heterozygosity rate of the single-nucleotide polymorphisms was 11.99% of these four cultivars. According to the enrichment analysis, there were 23,371 genes identified with putative modifications, and a total of 282 genes were related to carbohydrate metabolic processes. These results provide useful information for genetic research and future breeding, which can facilitate the selection procedures in vegetable soybean breeding.
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