Evidence map›Paper›PMID 35008724›Full record

ArticleInternational journal of molecular sciences2021

Exploring the Catalytic Mechanism of the RNA Cap Modification by nsp16-nsp10 Complex of SARS-CoV-2 through a QM/MM Approach.

José Rogério A Silva, Jaime Urban, Edson Araújo, Jerônimo Lameira, Vicent Moliner, Cláudio Nahum Alves

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.4field-weighted citation impact, top 40% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 7 citations in OpenAlex.

  1. Review
  2. Innate immune evasion strategies of SARS-CoV-2.Nature reviews. Microbiology · 2023
    Review
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

José Rogério A SilvaLaboratório de Planejamento e Desenvolvimento de Fármacos, Instituto de Ciências Exatas e Naturais, Universidade Federal do Pará, Belem 66075-110, Brazil.ORCID 0000-0003-2310-5107
Jaime UrbanLaboratório de Planejamento e Desenvolvimento de Fármacos, Instituto de Ciências Exatas e Naturais, Universidade Federal do Pará, Belem 66075-110, Brazil.
Edson AraújoLaboratório de Planejamento e Desenvolvimento de Fármacos, Instituto de Ciências Exatas e Naturais, Universidade Federal do Pará, Belem 66075-110, Brazil.
Jerônimo LameiraLaboratório de Planejamento e Desenvolvimento de Fármacos, Instituto de Ciências Exatas e Naturais, Universidade Federal do Pará, Belem 66075-110, Brazil.ORCID 0000-0001-7270-1517
Vicent MolinerBioComp Group, Institute of Advanced Materials (INAM), Universitat Jaume I, 12071 Castellon, Spain.
Cláudio Nahum AlvesLaboratório de Planejamento e Desenvolvimento de Fármacos, Instituto de Ciências Exatas e Naturais, Universidade Federal do Pará, Belem 66075-110, Brazil.ORCID 0000-0001-6576-4229
Universidade Federal do Pará · BRUniversitat Jaume I · ES

Funding

National Council for Scientific and Technological Development 402572/2018-1
6 · The paper itself

Abstract

The inhibition of key enzymes that may contain the viral replication of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) have assumed central importance in drug discovery projects. Nonstructural proteins (nsps) are essential for RNA capping and coronavirus replication since it protects the virus from host innate immune restriction. In particular, nonstructural protein 16 (nsp16) in complex with nsp10 is a Cap-0 binding enzyme. The heterodimer formed by nsp16-nsp10 methylates the 5'-end of virally encoded mRNAs to mimic cellular mRNAs and thus it is one of the enzymes that is a potential target for antiviral therapy. In this study, we have evaluated the mechanism of the 2'-

Indexed as

BiocatalysisBiomechanical PhenomenaMethylationMethyltransferasesMolecular Dynamics SimulationQuantum TheoryRNA CapsRNA Processing, Post-TranscriptionalSARS-CoV-2Viral Nonstructural ProteinsViral Regulatory and Accessory ProteinsMethyltransferasesNSP16 protein, SARS-CoV-2ORF1ab polyprotein, SARS-CoV-2RNA CapsViral Nonstructural ProteinsViral Regulatory and Accessory Proteins2′-O methylationcatalytic mechanismfree energynsp16-nsp10QM/MMSARS-CoV-2TS stabilization

Identifiers

PMID35008724
PMCPMC8745711
OpenAlexW4200009927

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.