Evidence map›Paper›PMID 35008668›Full record

ArticleInternational journal of molecular sciences2021

Changes in Homogalacturonan Metabolism in Banana Peel during Fruit Development and Ripening.

Tong Ning, Chengjie Chen, Ganjun Yi, Houbin Chen, Yudi Liu, Yanjie Fan, Jing Liu, Shule Chen, Sixuan Wei, Zexuan Li and 3 more

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
2.4field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 21 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Horticulture research · 2024
    Article
  5. Chromosome-level genome assemblies ofHorticulture research · 2024
    Article
  6. Article
  7. Plant Cell and Organism Development 2.0.International journal of molecular sciences · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 2 institutions in 1 country.

Tong NingDepartment of Horticulture, College of Horticulture, South China Agricultural University, Guangzhou 510642, China.
Chengjie ChenDepartment of Horticulture, College of Horticulture, South China Agricultural University, Guangzhou 510642, China.ORCID 0000-0001-5964-604X
Ganjun YiInstitute of Fruit Tree Research, Guangdong Academy of Agricultural Sciences, Guangzhou 510640, China.
Houbin ChenDepartment of Horticulture, College of Horticulture, South China Agricultural University, Guangzhou 510642, China.ORCID 0000-0001-8097-9033
Yudi LiuDepartment of Horticulture, College of Horticulture, South China Agricultural University, Guangzhou 510642, China.
Yanjie FanDepartment of Horticulture, College of Horticulture, South China Agricultural University, Guangzhou 510642, China.
Jing LiuDepartment of Horticulture, College of Horticulture, South China Agricultural University, Guangzhou 510642, China.
Shule ChenDepartment of Horticulture, College of Horticulture, South China Agricultural University, Guangzhou 510642, China.
Sixuan WeiDepartment of Horticulture, College of Horticulture, South China Agricultural University, Guangzhou 510642, China.
Zexuan LiDepartment of Horticulture, College of Horticulture, South China Agricultural University, Guangzhou 510642, China.
Yehuan TanDepartment of Horticulture, College of Horticulture, South China Agricultural University, Guangzhou 510642, China.
Zhenting HeDepartment of Horticulture, College of Horticulture, South China Agricultural University, Guangzhou 510642, China.
Chunxiang XuDepartment of Horticulture, College of Horticulture, South China Agricultural University, Guangzhou 510642, China.ORCID 0000-0002-5722-668X
South China Agricultural University · CNGuangdong Academy of Agricultural Sciences · CN

Funding

Earmarked Fund for Modern Agro-industry Technology Research System CARS-31-04Guangdong Province Special Fund for Modern Agriculture Industry Technology Innovation Teams 2021KJ109Key Research and Development Program of Guangdong Province for Modern Plant Breeding 2018B020202005National Key Research and Development Program of China 2018YFD1000300
6 · The paper itself

Abstract

Though numerous studies have focused on the cell wall disassembly of bananas during the ripening process, the modification of homogalacturonan (HG) during fruit development remains exclusive. To better understand the role of HGs in controlling banana fruit growth and ripening, RNA-Seq, qPCR, immunofluorescence labeling, and biochemical methods were employed to reveal their dynamic changes in banana peels during these processes. Most HG-modifying genes in banana peels showed a decline in expression during fruit development. Four polygalacturonase and three pectin acetylesterases showing higher expression levels at later developmental stages than earlier ones might be related to fruit expansion. Six out of the 10 top genes in the Core Enrichment Gene Set were HG degradation genes, and all were upregulated after softening, paralleled to the significant increase in HG degradation enzyme activities, decline in peel firmness, and the epitope levels of 2F4, CCRC-M38, JIM7, and LM18 antibodies. Most differentially expressed alpha-1,4-galacturonosyltransferases were upregulated by ethylene treatment, suggesting active HG biosynthesis during the fruit softening process. The epitope level of the CCRC-M38 antibody was positively correlated to the firmness of banana peel during fruit development and ripening. These results have provided new insights into the role of cell wall HGs in fruit development and ripening.

Indexed as

AntibodiesEpitopesFruitGene Expression ProfilingGene Expression Regulation, PlantGenes, PlantMusaPectinsTime FactorsAntibodiesEpitopesPectinspolygalacturonic acidbanana (Musa spp. AAA)fruit development and ripeningfruit peelhomogalacturonan metabolismimmunofluorescence labeling

Identifiers

PMID35008668
PMCPMC8745247
OpenAlexW4200014085

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.