Evidence map›Paper›PMID 35006040›Full record

ArticleBioengineered2022

Integrated bioinformatics and experiments reveal the roles and driving forces for HSF1 in colorectal cancer.

Xiaomin Ren, Liyuan Zhang, Xiaolin Ma, Jiaqiu Li, Zhong Lu

Open access · goldAbstract readVideo-Audio Media
In one paragraph

Article in Bioengineered, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed, 1 pooled it
0.9field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 1 synthesis or guideline pooled it, 12 citations in OpenAlex.

  1. Pooled it
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Xiaomin RenDepartment of Oncology, Affiliated Hospital of Weifang Medical University, Weifang, China.ORCID 0000-0001-8863-4726
Liyuan ZhangDepartment of Clinical Medicine, Medical College of Qingdao Binhai University, Qingdao, China.ORCID 0000-0003-2207-816X
Xiaolin MaDepartment of Oncology, Affiliated Hospital of Weifang Medical University, Weifang, China.ORCID 0000-0001-6079-981X
Jiaqiu LiDepartment of Oncology, Affiliated Hospital of Weifang Medical University, Weifang, China.ORCID 0000-0002-2292-6651
Zhong LuDepartment of Oncology, Affiliated Hospital of Weifang Medical University, Weifang, China.ORCID 0000-0001-8468-0282
Weifang Medical University · CNQingdao Binhai University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Heat shock factor 1 (HSF1) has watershed significance in different tumors. However, the roles and driving forces for HSF1 in colorectal cancer (CRC) are poorly understood. Our study integrally analyzed the roles and driving forces for HSF1 in CRC by bioinformatics and experiments. The expression and prognostic characteristics of HSF1 were analyzed via UALCAN, GEPIA2, TISIDB, Prognoscan and HPA databases. Then, we analyzed the correlation between HSF1 expression and immune features via TIMER2 database. Subsequently, we explored the driving forces for HSF1 abnormal expression in CRC by bioinformatics and experiments. Our results showed that HSF1 was overexpressed and correlated with poor prognosis in CRC. And the expression of HSF1 was significantly correlated with multiple immune cell infiltration and was negatively correlated with immunomodulators such as programmed cell death 1 ligand 1(PD-L1). Along with many driver genes in particular

Indexed as

Computational BiologyGene Expression Regulation, NeoplasticColorectal NeoplasmsHCT116 CellsHeat Shock Transcription FactorsHumansNeoplasm ProteinsHeat Shock Transcription FactorsHSF1 protein, humanNeoplasm ProteinsbioinformaticsbiomarkerHSF1HuRimmune therapysuper-enhancer

Identifiers

PMID35006040
PMCPMC8974194
OpenAlexW4206575956

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.