Evidence map›Paper›PMID 35004687›Full record

ArticleFrontiers in cell and developmental biology2021

Transcriptome-Wide m6A Analysis Provides Novel Insights Into Testicular Development and Spermatogenesis in Xia-Nan Cattle.

Shen-He Liu, Xiao-Ya Ma, Ting-Ting Yue, Zi-Chen Wang, Kun-Long Qi, Ji-Chao Li, Feng Lin, Hossam E Rushdi, Yu-Yang Gao, Tong Fu and 5 more

Open access · goldAbstract read
In one paragraph

Article in Frontiers in cell and developmental biology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.1field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
  2. Article
  3. Loss ofInternational journal of molecular sciences · 2025
    Article
  4. Article
  5. Comprehensive Analysis of the Transcriptome-Wide mInternational journal of molecular sciences · 2023
    Article
  6. Transcriptome Studies Reveal theAnimals : an open access journal from MDPI · 2023
    Article
  7. mActa biochimica et biophysica Sinica · 2023
    Review
  8. iScience · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 5 institutions in 2 countries.

Shen-He LiuCollege of Animal Science and Technology, Henan Agricultural University, Zhengzhou, China.
Xiao-Ya MaGuangxi Provincial Key Laboratory of Buffalo Genetics, Breeding and Reproduction Technology, Buffalo Research Institute, Chinese Academy of Agricultural Sciences, Nanning, China.
Ting-Ting YueHenan Dairy Herd Improvement Co., Ltd, Zhengzhou, China.
Zi-Chen WangCollege of Animal Science and Technology, Henan Agricultural University, Zhengzhou, China.
Kun-Long QiCollege of Animal Science and Technology, Henan Agricultural University, Zhengzhou, China.
Ji-Chao LiCollege of Animal Science and Technology, Henan Agricultural University, Zhengzhou, China.
Feng LinCollege of Animal Science and Technology, Henan Agricultural University, Zhengzhou, China.
Hossam E RushdiDepartment of Animal Production, Faculty of Agriculture, Cairo University, Giza, Egypt.
Yu-Yang GaoHenan Dingyuan Cattle Breeding Co., Ltd., Wuhan, China.
Tong FuCollege of Animal Science and Technology, Henan Agricultural University, Zhengzhou, China.
Ming LiCollege of Animal Science and Technology, Henan Agricultural University, Zhengzhou, China.
Teng-Yun GaoCollege of Animal Science and Technology, Henan Agricultural University, Zhengzhou, China.
Li-Guo YangChina Ministry of Education, Key Laboratory of Agricultural Animal Genetics, Breeding and Reproduction, College of Animal Science and Technology, Huazhong Agricultural University, Wuhan, China.
Xue-Lei HanCollege of Animal Science and Technology, Henan Agricultural University, Zhengzhou, China.
Ting-Xian DengGuangxi Provincial Key Laboratory of Buffalo Genetics, Breeding and Reproduction Technology, Buffalo Research Institute, Chinese Academy of Agricultural Sciences, Nanning, China.
Henan Agricultural University · CNGuangxi Buffalo Research Institute · CNCairo University · EGHuazhong Agricultural University · CNNational Beef Cattle Industrial Technology System · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Testis is the primary organ of the male reproductive tract in mammals that plays a substantial role in spermatogenesis. Improvement of our knowledge regarding the molecular mechanisms in testicular development and spermatogenesis will be reflected in producing spermatozoa of superior fertility. Evidence showed that N6-Methyladenosine (m6A) plays a dynamic role in post-transcription gene expression regulation and is strongly associated with production traits. However, the role of m6A in bovine testis has not been investigated yet. In this study, we conducted MeRIP-Seq analysis to explore the expression profiles of the m6A and its potential mechanism underlying spermatogenesis in nine bovine testes at three developmental stages (prepuberty, puberty and postpuberty). The experimental animals with triplicate in each stage were chosen based on their semen volume and sperm motility except for the prepuberty bulls and used for testes collection. By applying MeRIP-Seq analysis, a total of 8,774 m6A peaks and 6,206 m6A genes among the studied groups were identified. All the detected peaks were found to be mainly enriched in the coding region and 3'- untranslated regions. The cross-analysis of m6A and mRNA expression exhibited 502 genes with concomitant changes in the mRNA expression and m6A modification. Notably, 30 candidate genes were located in the largest network of protein-protein interactions. Interestingly, four key node genes (

Indexed as

cattlem6A modificationsemen qualitysequencingspermatogenesistestis

Identifiers

PMID35004687
PMCPMC8728086
OpenAlexW4200411311

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.