Evidence map›Paper›PMID 35002783›Full record

ReviewFrontiers in physiology2021

Using Imaging Mass Cytometry to Define Cell Identities and Interactions in Human Tissues.

Vijayakumar R Kakade, Marlene Weiss, Lloyd G Cantley

Open access · goldAbstract readReview
In one paragraph

Review in Frontiers in physiology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.9field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 15 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Vijayakumar R KakadeSection of Nephrology, Department of Internal Medicine, Yale University School of Medicine, New Haven, CT, United States.
Marlene WeissSection of Nephrology, Department of Internal Medicine, Yale University School of Medicine, New Haven, CT, United States.
Lloyd G CantleySection of Nephrology, Department of Internal Medicine, Yale University School of Medicine, New Haven, CT, United States.
Yale University · US

Funding

ConProject-002U2CDK114886 · NIDDK · UNIVERSITY OF WASHINGTON · PI KRETZLER, MATTHIAS · 2017 to 2021
$21.0M
Defining the Pathogenesis and Prognosis of Human Acute Interstitial NephritisR01DK126815 · NIDDK · YALE UNIVERSITY · PI CANTLEY, LLOYD G · 2020 to 2024
$2.6M
NIDDK NIH HHS R01 DK126815NIDDK NIH HHS U2C DK114886
6 · The paper itself

Abstract

In the evolving landscape of highly multiplexed imaging techniques that can be applied to study complex cellular microenvironments, this review characterizes the use of imaging mass cytometry (IMC) to study the human kidney. We provide technical details for antibody validation, cell segmentation, and data analysis specifically tailored to human kidney samples, and elaborate on phenotyping of kidney cell types and novel insights that IMC can provide regarding pathophysiological processes in the injured or diseased kidney. This review will provide the reader with the necessary background to understand both the power and the limitations of IMC and thus support better perception of how IMC analysis can improve our understanding of human disease pathogenesis and can be integrated with other technologies such as single cell sequencing and proteomics to provide spatial context to cellular data.

Indexed as

cell phenotypehighly multiplexed imagingimaging mass cytometryin situ imagingkidneykidney-MAPPS

Identifiers

PMID35002783
PMCPMC8727440
OpenAlexW4200227444

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.