Evidence map›Paper›PMID 34999210›Full record

ArticleMolecular therapy : the journal of the American Society of Gene Therapy2022

Immune profile and responses of a novel dengue DNA vaccine encoding an EDIII-NS1 consensus design based on Indo-African sequences.

Arun Sankaradoss, Suraj Jagtap, Junaid Nazir, Shefta E Moula, Ayan Modak, Joshuah Fialho, Meenakshi Iyer, Jayanthi S Shastri, Mary Dias, Ravisekhar Gadepalli and 21 more

Abstract read
In one paragraph

Article in Molecular therapy : the journal of the American Society of Gene Therapy, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

31 authors.

Arun SankaradossNational Centre for Biological Sciences, Tata Institute of Fundamental Research, Bangalore 560065, India. Electronic address: asankaradoss@ncbs.res.in.
Suraj JagtapDepartment of Chemical Engineering, Indian Institute of Science, Bangalore 560012, India.
Junaid NazirNational Centre for Biological Sciences, Tata Institute of Fundamental Research, Bangalore 560065, India.
Shefta E MoulaNational Centre for Biological Sciences, Tata Institute of Fundamental Research, Bangalore 560065, India.
Ayan ModakMolecular Virology Laboratory, Rajiv Gandhi Centre for Biotechnology (RGCB), Thiruvananthapuram, Kerala 695014, India.
Joshuah FialhoNational Centre for Biological Sciences, Tata Institute of Fundamental Research, Bangalore 560065, India.
Meenakshi IyerNational Centre for Biological Sciences, Tata Institute of Fundamental Research, Bangalore 560065, India.
Jayanthi S ShastriDepartment of Microbiology, T.N.Medical College & B.y.L.Nair Hospital, Mumbai 400008, India.
Mary DiasDivision of Infectious Disease, St. John's Medical College and Hospital, Bangalore 560034, India.
Ravisekhar GadepalliDepartment of Microbiology, All India Institute of Medical Sciences, Jodhpur 342005, India.
Alisha AggarwalDepartment of Microbiology, All India Institute of Medical Sciences, Jodhpur 342005, India.
Manoj VedpathakDepartment of Microbiology, T.N.Medical College & B.y.L.Nair Hospital, Mumbai 400008, India.
Sachee AgrawalDepartment of Microbiology, T.N.Medical College & B.y.L.Nair Hospital, Mumbai 400008, India.
Awadhesh PanditNational Centre for Biological Sciences, Tata Institute of Fundamental Research, Bangalore 560065, India.
Amul NisheethaNational Centre for Biological Sciences, Tata Institute of Fundamental Research, Bangalore 560065, India.
Anuj KumarNational Centre for Biological Sciences, Tata Institute of Fundamental Research, Bangalore 560065, India.
Mahasweta BordoloiNational Centre for Biological Sciences, Tata Institute of Fundamental Research, Bangalore 560065, India.
Mohamed ShafiNational Centre for Biological Sciences, Tata Institute of Fundamental Research, Bangalore 560065, India.
Bhagyashree ShelarNational Centre for Biological Sciences, Tata Institute of Fundamental Research, Bangalore 560065, India.
Swathi S BalachandraNational Centre for Biological Sciences, Tata Institute of Fundamental Research, Bangalore 560065, India.
Tina DamodarNational Centre for Biological Sciences, Tata Institute of Fundamental Research, Bangalore 560065, India.
Moses Muia MasikaKAVI Institute of Clinical Research, University of Nairobi, Nairobi 19676-00202, Kenya.
Patrick MwauraKAVI Institute of Clinical Research, University of Nairobi, Nairobi 19676-00202, Kenya.
Omu AnzalaKAVI Institute of Clinical Research, University of Nairobi, Nairobi 19676-00202, Kenya.
Kar MuthumaniVaccine and Immunotherapy Center, Wistar Institute, Philadelphia, PA 19104, USA.
Ramanathan SowdhaminiNational Centre for Biological Sciences, Tata Institute of Fundamental Research, Bangalore 560065, India.
Guruprasad R MedigeshiTranslational Health Science and Technology Institute, Faridabad, Haryana 121001, India.
Rahul RoyDepartment of Chemical Engineering, Indian Institute of Science, Bangalore, India; Molecular Biophysics Unit, Indian Institute of Science, Bangalore, India; Center for Biosystems Science and Engineering, Indian Institute of Science, Bangalore 560012, India.
Chitra PattabiramanDepartment of Neurovirology, National Institute of Mental Health and Neurosciences, Bangalore 560029, India.
Sudhir KrishnaNational Centre for Biological Sciences, Tata Institute of Fundamental Research, Bangalore 560065, India; School of Interdisciplinary Life Sciences, Indian Institute of Technology Goa, Ponda 404401, India.
Easwaran SreekumarMolecular Virology Laboratory, Rajiv Gandhi Centre for Biotechnology (RGCB), Thiruvananthapuram, Kerala 695014, India. Electronic address: esreekumar@rgcb.res.in.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The ongoing COVID-19 pandemic highlights the need to tackle viral variants, expand the number of antigens, and assess diverse delivery systems for vaccines against emerging viruses. In the present study, a DNA vaccine candidate was generated by combining in tandem envelope protein domain III (EDIII) of dengue virus serotypes 1-4 and a dengue virus (DENV)-2 non-structural protein 1 (NS1) protein-coding region. Each domain was designed as a serotype-specific consensus coding sequence derived from different genotypes based on the whole genome sequencing of clinical isolates in India and complemented with data from Africa. This sequence was further optimized for protein expression. In silico structural analysis of the EDIII consensus sequence revealed that epitopes are structurally conserved and immunogenic. The vaccination of mice with this construct induced pan-serotype neutralizing antibodies and antigen-specific T cell responses. Assaying intracellular interferon (IFN)-γ staining, immunoglobulin IgG2(a/c)/IgG1 ratios, and immune gene profiling suggests a strong Th1-dominant immune response. Finally, the passive transfer of immune sera protected AG129 mice challenged with a virulent, non-mouse-adapted DENV-2 strain. Our findings collectively suggest an alternative strategy for dengue vaccine design by offering a novel vaccine candidate with a possible broad-spectrum protection and a successful clinical translation either as a stand alone or in a mix and match strategy.

Indexed as

COVID-19DengueDengue VaccinesDengue VirusVaccines, DNAAntibodies, NeutralizingAntibodies, ViralConsensus SequenceHumansPandemicsViral Envelope ProteinsAntibodies, NeutralizingAntibodies, ViralDengue VaccinesVaccines, DNAViral Envelope Proteinsantibody-dependent enhancementconsensus sequencedenguedengue surveillanceDNA vaccineEDIII domainNS1 protein

Identifiers

PMID34999210
PMCPMC8736276

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.