Evidence map›Paper›PMID 34997845›Full record

ArticleArchives of microbiology2022

Mechanism of berberine hydrochloride interfering with biofilm formation of Hafnia alvei.

Yuesheng Pang, Sha Wang, Jiayue Tao, Jing Wang, Zhe Xue, Rufeng Wang

Abstract read
PubMed Publisher
In one paragraph

Article in Archives of microbiology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.6field-weighted citation impact, top 37% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 9 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. Review
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Yuesheng PangSchool of Life Sciences, Beijing University of Chinese Medicine, Beijing, 102488, China.
Sha WangSchool of Life Sciences, Beijing University of Chinese Medicine, Beijing, 102488, China.
Jiayue TaoSchool of Life Sciences, Beijing University of Chinese Medicine, Beijing, 102488, China.
Jing WangSchool of Life Sciences, Beijing University of Chinese Medicine, Beijing, 102488, China.
Zhe XueSchool of Traditional Chinese Medicine, Beijing University of Chinese Medicine, Beijing, 102488, China. xuezhesanctity@163.com.
Rufeng WangSchool of Life Sciences, Beijing University of Chinese Medicine, Beijing, 102488, China. wrf@bucm.edu.cn.ORCID http://orcid.org/0000-0001-7283-5005
Beijing University of Chinese Medicine · CN

Funding

National Key Clinical Specialty Discipline Construction Program of China 2018YFC1704506
6 · The paper itself

Abstract

The mechanism of berberine hydrochloride (BBH) inhibiting the biofilm formation of Hafnia alvei was investigated in this study. The antibiofilm potential of BBH was evaluated by confocal laser scanning microscopy (CLSM) and scanning electron microscopy (SEM) as well as crystal violet staining. The quorum-sensing (QS) inhibition was revealed by determination of QS-related genes expression and related signal molecules production using real-time quantitative PCR (RT-qPCR) and high performance liquid chromatography (HPLC). The binding of BBH to receptor proteins was simulated by molecular docking and molecular dynamics simulations. It was found that BBH at sub-minimum inhibitory concentrations (sub-MICs) significantly reduced the biofilm formation of H. alvei in a dose dependent manner. BBH inhibited the bacterial swimming motility, decreased the transcription of halI and halR genes, and reduced the production of signal molecule C14-HSL. It bound to HalR protein mainly through Van der Waals force and electrostatic interaction force. Based on these results, it was concluded that BBH inhibits the biofilm formation of H. alvei and the mechanism is related to its interference with QS through down-regulating the expression of halI and halR genes.

Indexed as

BerberineHafnia alveiAnti-Bacterial AgentsBiofilmsMolecular Docking SimulationQuorum SensingAnti-Bacterial AgentsBerberineBerberine hydrochlorideBiofilmHafnia alveiQuorum sensing

Identifiers

PMID34997845
OpenAlexW4205945261

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.