Evidence map›Paper›PMID 34996871›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2022

Structural transitions in the GTP cap visualized by cryo-electron microscopy of catalytically inactive microtubules.

Benjamin J LaFrance, Johanna Roostalu, Gil Henkin, Basil J Greber, Rui Zhang, Davide Normanno, Chloe O McCollum, Thomas Surrey, Eva Nogales

Open access · hybridAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 54 papers.

0numbers the graph read from it
0cells of the map it votes in
54citing papers in PubMed
10.0field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

54 citing papers in PubMed, 93 citations in OpenAlex.

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  7. Tubulin flux at spastin-induced nanodamage sites regulates microtubule rescue frequency and EB1 lifetimes.Proceedings of the National Academy of Sciences of the United States of America · 2026
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  17. The microtubule GTP-tubulin cap size is modulated during cell division.bioRxiv : the preprint server for biology · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 5 institutions in 3 countries.

Benjamin J LaFranceDepartment of Molecular and Cell Biology, University of California, Berkeley, CA 94720.ORCID 0000-0003-0229-5255
Johanna RoostaluThe Francis Crick Institute, London NW1 1AT, United Kingdom.ORCID 0000-0002-6757-0468
Gil HenkinThe Francis Crick Institute, London NW1 1AT, United Kingdom.ORCID 0000-0003-4838-9134
Basil J GreberCalifornia Institute for Quantitative Biosciences, University of California, Berkeley, CA 94720.ORCID 0000-0001-9379-7159
Rui ZhangCalifornia Institute for Quantitative Biosciences, University of California, Berkeley, CA 94720.ORCID 0000-0003-3159-9565
Davide NormannoCentre for Genomic Regulation, Barcelona Institute of Science and Technology, 08003 Barcelona, Spain.ORCID 0000-0003-4740-5542
Chloe O McCollumDepartment of Molecular and Cell Biology, University of California, Berkeley, CA 94720.ORCID 0000-0002-3071-4886
Thomas SurreyThe Francis Crick Institute, London NW1 1AT, United Kingdom; thomas.surrey@crg.eu enogales@lbl.gov.
Eva NogalesDepartment of Molecular and Cell Biology, University of California, Berkeley, CA 94720; thomas.surrey@crg.eu enogales@lbl.gov.ORCID 0000-0001-9816-3681
QB3 · USThe Francis Crick Institute · GBUniversity of California, Berkeley · USCentre for Genomic Regulation · ESInstitució Catalana de Recerca i Estudis Avançats · ES

Funding

Structural studies of function and regulation of microtubules and transcriptional gene expression machineryR35GM127018 · NIGMS · UNIVERSITY OF CALIFORNIA BERKELEY · PI Eva Nogales · 2018 to 2026
$4.3M
European Research Council 323042Howard Hughes Medical InstituteNIGMS NIH HHS R35 GM127018Wellcome Trust FC001163
6 · The paper itself

Abstract

Microtubules (MTs) are polymers of αβ-tubulin heterodimers that stochastically switch between growth and shrinkage phases. This dynamic instability is critically important for MT function. It is believed that GTP hydrolysis within the MT lattice is accompanied by destabilizing conformational changes and that MT stability depends on a transiently existing GTP cap at the growing MT end. Here, we use cryo-electron microscopy and total internal reflection fluorescence microscopy of GTP hydrolysis-deficient MTs assembled from mutant recombinant human tubulin to investigate the structure of a GTP-bound MT lattice. We find that the GTP-MT lattice of two mutants in which the catalytically active glutamate in α-tubulin was substituted by inactive amino acids (E254A and E254N) is remarkably plastic. Undecorated E254A and E254N MTs with 13 protofilaments both have an expanded lattice but display opposite protofilament twists, making these lattices distinct from the compacted lattice of wild-type GDP-MTs. End-binding proteins of the EB family have the ability to compact both mutant GTP lattices and to stabilize a negative twist, suggesting that they promote this transition also in the GTP cap of wild-type MTs, thereby contributing to the maturation of the MT structure. We also find that the MT seam appears to be stabilized in mutant GTP-MTs and destabilized in GDP-MTs, supporting the proposal that the seam plays an important role in MT stability. Together, these structures of catalytically inactive MTs add mechanistic insight into the GTP state of MTs, the stability of the GTP- and GDP-bound lattice, and our overall understanding of MT dynamic instability.

Indexed as

Cryoelectron MicroscopyGuanosine TriphosphateHumansHydrolysisKinesinsMicrotubule-Associated ProteinsMicrotubulesRecombinant ProteinsTubulinGuanosine TriphosphateKinesinsMicrotubule-Associated ProteinsRecombinant ProteinsTubulincryo-EMdynamic instabilityGTPmicrotubulesTIRF microscopy

Identifiers

PMID34996871
PMCPMC8764682
OpenAlexW4206554895

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.