Evidence map›Paper›PMID 34996412›Full record

ArticleBMC cancer2022

Preemptive pharmacogenetic testing to guide chemotherapy dosing in patients with gastrointestinal malignancies: a qualitative study of barriers to implementation.

Kelsey S Lau-Min, Lisa A Varughese, Maria N Nelson, Christine Cambareri, Nandi J Reddy, Randall A Oyer, Ursina R Teitelbaum, Sony Tuteja

Registry-linked trialOpen access · goldAbstract read
In one paragraph

Article in BMC cancer, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT06559462 (Optimizing Nudge Strategies to Increase the Adoption of DPYD Testing in Patients With Gastrointestinal), which is not on this map. Cited by 21 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed, 1 pooled it
2.7field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT06559462 nacompletednot on this mapstarted 2024, after this paper: background citation

Optimizing Nudge Strategies to Increase the Adoption of DPYD Testing in Patients With Gastrointestinal (GI) Malignancies Treated With Fluoropyrimidines.

TypeinterventionalSponsorAbramson Cancer Center at Penn MedicineRan2024 to 2025Enrolled50ConditionsDPYD Gene Mutation, Gastrointestinal Cancer, Health Care Seeking BehaviorArmsFocus Group, Discrete Choice
3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 1 synthesis or guideline pooled it, 33 citations in OpenAlex.

  1. Pooled it
  2. Implementation ofJCO precision oncology · 2025
    Trial
  3. Article
  4. Article
  5. Review
  6. Article
  7. Review
  8. Review
  9. How is Value Defined in Molecular Testing in Cancer? A Scoping Review.Applied health economics and health policy · 2025
    Article
  10. Article
  11. Recommendations for pharmacogenetic testing in clinical practice guidelines in the US.American journal of health-system pharmacy : AJHP : official journal of the American Society of Health-System Pharmacists · 2024
    Review
  12. Article
  13. Strategies for DPYD testing prior to fluoropyrimidine chemotherapy in the US.Supportive care in cancer : official journal of the Multinational Association of Supportive Care in Cancer · 2024
    Article
  14. Observational
  15. Overcoming Barriers to Discovery and Implementation of Equitable Pharmacogenomic Testing in Oncology.Journal of clinical oncology : official journal of the American Society of Clinical Oncology · 2024
    Review
  16. Article
  17. Article
  18. Journal of clinical oncology : official journal of the American Society of Clinical Oncology · 2023
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 5 institutions in 1 country.

Kelsey S Lau-MinDivision of Hematology/Oncology, Department of Medicine, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, USA.
Lisa A VarugheseDivision of Translational Medicine and Human Genetics, Department of Medicine, Perelman School of Medicine, Smilow Center for Translational Research, University of Pennsylvania, 3400 Civic Center Boulevard, Bldg. 421 11th Floor, Room 143, Philadelphia, PA, 19104-5158, USA.
Maria N NelsonGartner Consulting, Stamford, CT, USA.
Christine CambareriDepartment of Pharmacy, Hospital of the University of Pennsylvania, Philadelphia, PA, USA.
Nandi J ReddyAnn B. Barshinger Cancer Institute, Penn Medicine at Lancaster General Health, Lancaster, PA, USA.
Randall A OyerAnn B. Barshinger Cancer Institute, Penn Medicine at Lancaster General Health, Lancaster, PA, USA.
Ursina R TeitelbaumDivision of Hematology/Oncology, Department of Medicine, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, USA.
Sony TutejaDivision of Translational Medicine and Human Genetics, Department of Medicine, Perelman School of Medicine, Smilow Center for Translational Research, University of Pennsylvania, 3400 Civic Center Boulevard, Bldg. 421 11th Floor, Room 143, Philadelphia, PA, 19104-5158, USA. sonyt@pennmedicine.upenn.edu.
University of Pennsylvania · USGaertner (United States) · USHospital of the University of Pennsylvania · USLancaster General Hospital · USUniversity of Pennsylvania Health System · US

Funding

CANCER CLINICAL EPIDEMIOLOGY TRAINING GRANTT32CA009679 · NCI · UNIVERSITY OF PENNSYLVANIA · PI Richard Aplenc, Karen Glanz · 1992 to 2026
$11.1M
NRSA Training CoreTL1TR001880 · NCATS · UNIVERSITY OF PENNSYLVANIA · PI MEAGHER, EMMA ANNE · 2016 to 2025
$10.0M
Impact of the gut microbiome on response to lipid lowering therapyK23HL143161 · NHLBI · UNIVERSITY OF PENNSYLVANIA · PI TUTEJA, SONY · 2019 to 2022
$695k
NCATS NIH HHS TL1 TR001880NCI NIH HHS T32 CA009679NHLBI NIH HHS K23 HL143161
6 · The paper itself

Abstract

backgroundPharmacogenetic (PGx) testing for germline variants in the DPYD and UGT1A1 genes can be used to guide fluoropyrimidine and irinotecan dosing, respectively. Despite the known association between PGx variants and chemotherapy toxicity, preemptive testing prior to chemotherapy initiation is rarely performed in routine practice.

methodsWe conducted a qualitative study of oncology clinicians to identify barriers to using preemptive PGx testing to guide chemotherapy dosing in patients with gastrointestinal malignancies. Each participant completed a semi-structured interview informed by the Consolidated Framework for Implementation Research (CFIR). Interviews were analyzed using an inductive content analysis approach.

resultsParticipants included sixteen medical oncologists and nine oncology pharmacists from one academic medical center and two community hospitals in Pennsylvania. Barriers to the use of preemptive PGx testing to guide chemotherapy dosing mapped to four CFIR domains: intervention characteristics, outer setting, inner setting, and characteristics of individuals. The most prominent themes included 1) a limited evidence base, 2) a cumbersome and lengthy testing process, and 3) a lack of insurance coverage for preemptive PGx testing. Additional barriers included clinician lack of knowledge, difficulty remembering to order PGx testing for eligible patients, challenges with PGx test interpretation, a questionable impact of preemptive PGx testing on clinical care, and a lack of alternative therapeutic options for some patients found to have actionable PGx variants.

conclusionsSuccessful adoption of preemptive PGx-guided chemotherapy dosing in patients with gastrointestinal malignancies will require a multifaceted effort to demonstrate clinical effectiveness while addressing the contextual factors identified in this study.

Indexed as

Clinical Decision-MakingPharmacogenomic TestingAdultAgedAntineoplastic AgentsFemaleGastrointestinal NeoplasmsHealth Services AccessibilityHumansMaleMiddle AgedOncologistsPractice Patterns, Physicians'Qualitative ResearchAntineoplastic AgentsBarriers to implementationChemotherapy dosingGastrointestinal cancersPharmacogenetic testing

Identifiers

PMID34996412
PMCPMC8742388
OpenAlexW4205240369

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.