Evidence map›Paper›PMID 34995415›Full record

ArticleThe FEBS journal2022

Off-target inhibition of NGLY1 by the polycaspase inhibitor Z-VAD-fmk induces cellular autophagy.

Sarah H Needs, Martin D Bootman, Jeff E Grotzke, Holger B Kramer, Sarah A Allman

Open access · hybridAbstract read
In one paragraph

Article in The FEBS journal, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 17 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Generation and characterization of NGLY1 patient-derived midbrain organoids.Frontiers in cell and developmental biology · 2023
    Article
  6. Article
  7. Review
  8. Article
  9. Article
  10. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 2 countries.

Sarah H NeedsSchool of Life, Health and Chemical Sciences, The Open University, Milton Keynes, UK.
Martin D BootmanSchool of Life, Health and Chemical Sciences, The Open University, Milton Keynes, UK.
Jeff E GrotzkeYale University School of Medicine, New Haven, CT, USA.
Holger B KramerDepartment of Physiology, Anatomy and Genetics, University of Oxford, UK.
Sarah A AllmanSchool of Life, Health and Chemical Sciences, The Open University, Milton Keynes, UK.ORCID 0000-0003-4904-4138
The Open University · GBUniversity of Oxford · GBYale University · US

Funding

Wellcome Trust
6 · The paper itself

Abstract

The polycaspase inhibitor Z-VAD-fmk acts as an inhibitor of peptide: N-glycanase (NGLY1), an endoglycosidase which cleaves N-linked glycans from glycoproteins exported from the endoplasmic reticulum (ER) during ER-associated degradation (ERAD). Both pharmacological N-glycanase inhibition by Z-VAD-fmk and siRNA-mediated knockdown (KD) of NGLY1 induce GFP-LC3-positive puncta in HEK 293 cells. The activation of ER stress markers or induction of reactive oxygen species (ROS) is not observed under either condition. Moreover, Ca

Indexed as

FibroblastsProteomicsAnimalsAutophagyCaspasesHEK293 CellsHumansMicePeptide-N4-(N-acetyl-beta-glucosaminyl) Asparagine AmidasePeptidesCaspasesPeptide-N4-(N-acetyl-beta-glucosaminyl) Asparagine AmidasePeptidesautophagosome proteomicsautophagyNGLY1Peptide: N-glycanase 1Z-VAD-fmk

Identifiers

PMID34995415
PMCPMC9304259
OpenAlexW4205323495

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.