Evidence map›Paper›PMID 34995328›Full record

ArticlePloS one2022

Characterization of cassava ORANGE proteins and their capability to increase provitamin A carotenoids accumulation.

Angélica M Jaramillo, Santiago Sierra, Paul Chavarriaga-Aguirre, Diana Katherine Castillo, Anestis Gkanogiannis, Luis Augusto Becerra López-Lavalle, Juan Pablo Arciniegas, Tianhu Sun, Li Li, Ralf Welsch and 2 more

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in PloS one, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
3.8field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 18 citations in OpenAlex.

  1. Review
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 3 countries.

Angélica M JaramilloHarvestPlus, c/o The Alliance of Bioversity International and the International Center for Tropical Agriculture (CIAT), Cali, Colombia.ORCID 0000-0002-7463-6816
Santiago SierraThe Alliance of Bioversity International and the International Center for Tropical Agriculture (CIAT), Cali, Colombia.ORCID 0000-0002-3608-0597
Paul Chavarriaga-AguirreThe Alliance of Bioversity International and the International Center for Tropical Agriculture (CIAT), Cali, Colombia.
Diana Katherine CastilloThe Alliance of Bioversity International and the International Center for Tropical Agriculture (CIAT), Cali, Colombia.ORCID 0000-0002-0950-0074
Anestis GkanogiannisThe Alliance of Bioversity International and the International Center for Tropical Agriculture (CIAT), Cali, Colombia.
Luis Augusto Becerra López-LavalleThe Alliance of Bioversity International and the International Center for Tropical Agriculture (CIAT), Cali, Colombia.
Juan Pablo ArciniegasThe Alliance of Bioversity International and the International Center for Tropical Agriculture (CIAT), Cali, Colombia.
Tianhu SunRobert W. Holley Center for Agriculture and Health, USDA-ARS, Cornell University, Ithaca, New York, United States of America.
Li LiRobert W. Holley Center for Agriculture and Health, USDA-ARS, Cornell University, Ithaca, New York, United States of America.
Ralf WelschFaculty of Biology II, University of Freiburg, Freiburg, Germany.
Erick BoyHarvestPlus, International Food Policy Research Institute, Washington, DC, United States of America.
Daniel ÁlvarezHarvestPlus, c/o The Alliance of Bioversity International and the International Center for Tropical Agriculture (CIAT), Cali, Colombia.ORCID 0000-0002-5930-2295
Bioversity International · COCornell University · USInternational Food Policy Research Institute · USUniversity of Freiburg · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Cassava (Manihot esculenta Crantz) biofortification with provitamin A carotenoids is an ongoing process that aims to alleviate vitamin A deficiency. The moderate content of provitamin A carotenoids achieved so far limits the contribution to providing adequate dietary vitamin A levels. Strategies to increase carotenoid content focused on genes from the carotenoids biosynthesis pathway. In recent years, special emphasis was given to ORANGE protein (OR), which promotes the accumulation of carotenoids and their stability in several plants. The aim of this work was to identify, characterize and investigate the role of OR in the biosynthesis and stabilization of carotenoids in cassava and its relationship with phytoene synthase (PSY), the rate-limiting enzyme of the carotenoids biosynthesis pathway. Gene and protein characterization of OR, expression levels, protein amounts and carotenoids levels were evaluated in roots of one white (60444) and two yellow cassava cultivars (GM5309-57 and GM3736-37). Four OR variants were found in yellow cassava roots. Although comparable expression was found for three variants, significantly higher OR protein amounts were observed in the yellow varieties. In contrast, cassava PSY1 expression was significantly higher in the yellow cultivars, but PSY protein amount did not vary. Furthermore, we evaluated whether expression of one of the variants, MeOR_X1, affected carotenoid accumulation in cassava Friable Embryogenic Callus (FEC). Overexpression of maize PSY1 alone resulted in carotenoids accumulation and induced crystal formation. Co-expression with MeOR_X1 led to greatly increase of carotenoids although PSY1 expression was high in the co-expressed FEC. Our data suggest that posttranslational mechanisms controlling OR and PSY protein stability contribute to higher carotenoid levels in yellow cassava. Moreover, we showed that cassava FEC can be used to study the efficiency of single and combinatorial gene expression in increasing the carotenoid content prior to its application for the generation of biofortified cassava with enhanced carotenoids levels.

Indexed as

Biosynthetic PathwaysCarotenoidsGene Expression Regulation, PlantGenes, PlantGeranylgeranyl-Diphosphate GeranylgeranyltransferaseManihotPlant ProteinsPlant RootsProvitaminsVitamin ACarotenoidsGeranylgeranyl-Diphosphate GeranylgeranyltransferasePlant ProteinsProvitaminsVitamin A

Identifiers

PMID34995328
PMCPMC8741059
OpenAlexW4205514768

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.